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Cluster: C111.CMAG_1_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C111_contig_23 C111_contig_23_372 430285 433158 - GH106
CAZyme C111_contig_23 C111_contig_23_373 433438 435813 - GH31
TC C111_contig_23 C111_contig_23_374 436404 437951 + 3.A.2.1.7
pfam C111_contig_23 C111_contig_23_375 437948 438187 + ATP-synt_DE_N
NULL(UNKNOWN) C111_contig_23 C111_contig_23_376 438302 438724 + NULL(UNKNOWN)
[View Structural Homologs]
TC C111_contig_23 C111_contig_23_377 438726 439916 + 3.A.2.1.7
Gene ID: C111_contig_23_372
Type: CAZyme
Location: 430285 - 433158 (-)
Gene ID: C111_contig_23_373
Type: CAZyme
Location: 433438 - 435813 (-)
Gene ID: C111_contig_23_374
Type: TC
Location: 436404 - 437951 (+)
Gene ID: C111_contig_23_375
Type: pfam
Location: 437948 - 438187 (+)
Gene ID: C111_contig_23_376
Type:
Location: 438302 - 438724 (+)
Gene ID: C111_contig_23_377
Type: TC
Location: 438726 - 439916 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C111_contig_23_372 vegetarian > omnivore 1.50131 0.00450
C111_contig_23_373 vegetarian > omnivore 1.26779 0.00450
C111_contig_23_375 vegetarian > omnivore 1.10918 0.00450

🧭 Explore Read Mapping of CGC

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