Cluster: C111.CMAG_1_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: C111.CMAG_1
- CGC Family ID: CGCFAM_04628
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C111_contig_23 | C111_contig_23_149 | 150344 | 153070 | + | 4.A.2.1.17 |
| CAZyme | C111_contig_23 | C111_contig_23_150 | 153314 | 154681 | - | GH23 |
| TC | C111_contig_23 | C111_contig_23_151 | 154718 | 156820 | - | 1.B.14.15.2 |
Gene ID: C111_contig_23_149
Type: TC
Location: 150344 - 153070 (+)
Type: TC
Location: 150344 - 153070 (+)
Gene ID: C111_contig_23_150
Type: CAZyme
Location: 153314 - 154681 (-)
Type: CAZyme
Location: 153314 - 154681 (-)
Gene ID: C111_contig_23_151
Type: TC
Location: 154718 - 156820 (-)
Type: TC
Location: 154718 - 156820 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A indistinctus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C111_contig_23_151 | vegetarian > omnivore | 1.01540 | 0.00450 |