Cluster: C111.CMAG_1_CGC36
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: C111.CMAG_1
- CGC Family ID: CGCFAM_01741
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C111_contig_23 | C111_contig_23_2316 | 2805607 | 2806614 | - | GT27 |
| pfam | C111_contig_23 | C111_contig_23_2317 | 2806703 | 2807680 | - | Lip_A_acyltrans |
| pfam | C111_contig_23 | C111_contig_23_2318 | 2807680 | 2808459 | - | Inositol_P |
| TC | C111_contig_23 | C111_contig_23_2319 | 2808449 | 2809861 | - | 9.B.145.1.2 |
Gene ID: C111_contig_23_2316
Type: CAZyme
Location: 2805607 - 2806614 (-)
Type: CAZyme
Location: 2805607 - 2806614 (-)
Gene ID: C111_contig_23_2317
Type: pfam
Location: 2806703 - 2807680 (-)
Type: pfam
Location: 2806703 - 2807680 (-)
Gene ID: C111_contig_23_2318
Type: pfam
Location: 2807680 - 2808459 (-)
Type: pfam
Location: 2807680 - 2808459 (-)
Gene ID: C111_contig_23_2319
Type: TC
Location: 2808449 - 2809861 (-)
Type: TC
Location: 2808449 - 2809861 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A indistinctus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C111_contig_23_2316 | vegetarian > omnivore | 1.01715 | 0.00450 |
| C111_contig_23_2318 | vegetarian > omnivore | 1.07391 | 0.00450 |
| C111_contig_23_2319 | vegan > omnivore | 1.46386 | 0.03702 |
| C111_contig_23_2319 | vegetarian > omnivore | 1.10036 | 0.00450 |