Cluster: C111.CMAG_1_CGC26
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: C111.CMAG_1
- CGC Family ID: CGCFAM_07885
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C111_contig_23 | C111_contig_23_1316 | 1613009 | 1615306 | - | GH139 |
| sulfatase | C111_contig_23 | C111_contig_23_1317 | 1615414 | 1616157 | - | S1_8 |
| TC | C111_contig_23 | C111_contig_23_1318 | 1616210 | 1617637 | - | 1.A.23.4.5 |
| TC | C111_contig_23 | C111_contig_23_1319 | 1617752 | 1618741 | - | 1.B.57.4.3 |
Gene ID: C111_contig_23_1316
Type: CAZyme
Location: 1613009 - 1615306 (-)
Type: CAZyme
Location: 1613009 - 1615306 (-)
Gene ID: C111_contig_23_1317
Type: sulfatase
Location: 1615414 - 1616157 (-)
Type: sulfatase
Location: 1615414 - 1616157 (-)
Gene ID: C111_contig_23_1318
Type: TC
Location: 1616210 - 1617637 (-)
Type: TC
Location: 1616210 - 1617637 (-)
Gene ID: C111_contig_23_1319
Type: TC
Location: 1617752 - 1618741 (-)
Type: TC
Location: 1617752 - 1618741 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A indistinctus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C111_contig_23_1316 | vegan > omnivore | 1.09824 | 0.03702 |
| C111_contig_23_1316 | vegetarian > omnivore | 1.60879 | 0.00450 |
| C111_contig_23_1317 | vegetarian > omnivore | 1.21415 | 0.00450 |
| C111_contig_23_1319 | vegetarian > omnivore | 1.23660 | 0.00450 |