Cluster: C111.CMAG_1_CGC20
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 5
- Substrate:
- Genome ID: C111.CMAG_1
- CGC Family ID: CGCFAM_00040
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C111_contig_23 | C111_contig_23_1085 | 1339815 | 1340378 | - | GT4 |
| pfam | C111_contig_23 | C111_contig_23_1086 | 1340383 | 1340937 | - | Glyco_transf_4 | Glyco_trans_4_2 |
| CAZyme | C111_contig_23 | C111_contig_23_1087 | 1341195 | 1342283 | - | GT4 |
| CAZyme | C111_contig_23 | C111_contig_23_1088 | 1342292 | 1343371 | - | GT4 |
| pfam | C111_contig_23 | C111_contig_23_1089 | 1343384 | 1344562 | - | EpsG |
| CAZyme | C111_contig_23 | C111_contig_23_1090 | 1344574 | 1345470 | - | GT2 |
| NULL(UNKNOWN) | C111_contig_23 | C111_contig_23_1091 | 1345474 | 1346376 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | C111_contig_23 | C111_contig_23_1092 | 1346389 | 1347393 | - | GT8 |
| TC | C111_contig_23 | C111_contig_23_1093 | 1347404 | 1348840 | - | 2.A.66.2.16 |
Gene ID: C111_contig_23_1085
Type: CAZyme
Location: 1339815 - 1340378 (-)
Type: CAZyme
Location: 1339815 - 1340378 (-)
Gene ID: C111_contig_23_1086
Type: pfam
Location: 1340383 - 1340937 (-)
Type: pfam
Location: 1340383 - 1340937 (-)
Gene ID: C111_contig_23_1087
Type: CAZyme
Location: 1341195 - 1342283 (-)
Type: CAZyme
Location: 1341195 - 1342283 (-)
Gene ID: C111_contig_23_1088
Type: CAZyme
Location: 1342292 - 1343371 (-)
Type: CAZyme
Location: 1342292 - 1343371 (-)
Gene ID: C111_contig_23_1089
Type: pfam
Location: 1343384 - 1344562 (-)
Type: pfam
Location: 1343384 - 1344562 (-)
Gene ID: C111_contig_23_1090
Type: CAZyme
Location: 1344574 - 1345470 (-)
Type: CAZyme
Location: 1344574 - 1345470 (-)
Gene ID: C111_contig_23_1091
Type:
Location: 1345474 - 1346376 (-)
Type:
Location: 1345474 - 1346376 (-)
Gene ID: C111_contig_23_1092
Type: CAZyme
Location: 1346389 - 1347393 (-)
Type: CAZyme
Location: 1346389 - 1347393 (-)
Gene ID: C111_contig_23_1093
Type: TC
Location: 1347404 - 1348840 (-)
Type: TC
Location: 1347404 - 1348840 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A indistinctus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.