Cluster: C111.CMAG_1_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: C111.CMAG_1
- CGC Family ID: CGCFAM_05163
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C111_contig_23 | C111_contig_23_662 | 798600 | 799928 | - | GT30 |
| TF | C111_contig_23 | C111_contig_23_663 | 799934 | 800599 | - | 0037767 |
| pfam | C111_contig_23 | C111_contig_23_664 | 800861 | 802927 | - | Rotamase | Rotamase_2 | Rotamase_3 | SurA_N_2 | SurA_N_3 |
| TC | C111_contig_23 | C111_contig_23_665 | 803048 | 804403 | - | 9.A.40.2.2 |
Gene ID: C111_contig_23_662
Type: CAZyme
Location: 798600 - 799928 (-)
Type: CAZyme
Location: 798600 - 799928 (-)
Gene ID: C111_contig_23_663
Type: TF
Location: 799934 - 800599 (-)
Type: TF
Location: 799934 - 800599 (-)
Gene ID: C111_contig_23_664
Type: pfam
Location: 800861 - 802927 (-)
Type: pfam
Location: 800861 - 802927 (-)
Gene ID: C111_contig_23_665
Type: TC
Location: 803048 - 804403 (-)
Type: TC
Location: 803048 - 804403 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A indistinctus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C111_contig_23_663 | vegetarian > omnivore | 1.43023 | 0.00450 |