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Cluster: C11.bin_11_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C11_contig_136 C11_contig_136_668 678155 679639 - GH32
CAZyme C11_contig_136 C11_contig_136_669 679654 680997 - GH172
TC C11_contig_136 C11_contig_136_670 681020 681850 - 3.A.1.1.18
TC C11_contig_136 C11_contig_136_671 681854 682726 - 3.A.1.1.20
STP C11_contig_136 C11_contig_136_672 682801 684123 - SBP_bac_1
TF C11_contig_136 C11_contig_136_673 684359 685342 - LacI
CAZyme C11_contig_136 C11_contig_136_674 685495 686622 - GH172
TC C11_contig_136 C11_contig_136_675 686629 687456 - 3.A.1.1.46
TC C11_contig_136 C11_contig_136_676 687453 688385 - 3.A.1.1.10
STP C11_contig_136 C11_contig_136_677 688476 689762 - SBP_bac_1
CAZyme C11_contig_136 C11_contig_136_678 689766 691223 - GH32
TF C11_contig_136 C11_contig_136_679 691486 692538 + LacI
TC C11_contig_136 C11_contig_136_680 692565 693191 + 9.B.28.1.3
NULL(UNKNOWN) C11_contig_136 C11_contig_136_681 693635 693874 + NULL(UNKNOWN)
[View Structural Homologs]
TC C11_contig_136 C11_contig_136_682 693975 695141 - 2.A.86.1.8
TC C11_contig_136 C11_contig_136_683 695201 697747 - 3.A.3.2.21
TF C11_contig_136 C11_contig_136_684 698062 698748 - GntR
peptidase C11_contig_136 C11_contig_136_685 698820 700133 - M18.UPW
TC C11_contig_136 C11_contig_136_686 700137 701570 - 2.A.3.7.2
Gene ID: C11_contig_136_668
Type: CAZyme
Location: 678155 - 679639 (-)
Gene ID: C11_contig_136_669
Type: CAZyme
Location: 679654 - 680997 (-)
Gene ID: C11_contig_136_670
Type: TC
Location: 681020 - 681850 (-)
Gene ID: C11_contig_136_671
Type: TC
Location: 681854 - 682726 (-)
Gene ID: C11_contig_136_672
Type: STP
Location: 682801 - 684123 (-)
Gene ID: C11_contig_136_673
Type: TF
Location: 684359 - 685342 (-)
Gene ID: C11_contig_136_674
Type: CAZyme
Location: 685495 - 686622 (-)
Gene ID: C11_contig_136_675
Type: TC
Location: 686629 - 687456 (-)
Gene ID: C11_contig_136_676
Type: TC
Location: 687453 - 688385 (-)
Gene ID: C11_contig_136_677
Type: STP
Location: 688476 - 689762 (-)
Gene ID: C11_contig_136_678
Type: CAZyme
Location: 689766 - 691223 (-)
Gene ID: C11_contig_136_679
Type: TF
Location: 691486 - 692538 (+)
Gene ID: C11_contig_136_680
Type: TC
Location: 692565 - 693191 (+)
Gene ID: C11_contig_136_681
Type:
Location: 693635 - 693874 (+)
Gene ID: C11_contig_136_682
Type: TC
Location: 693975 - 695141 (-)
Gene ID: C11_contig_136_683
Type: TC
Location: 695201 - 697747 (-)
Gene ID: C11_contig_136_684
Type: TF
Location: 698062 - 698748 (-)
Gene ID: C11_contig_136_685
Type: peptidase
Location: 698820 - 700133 (-)
Gene ID: C11_contig_136_686
Type: TC
Location: 700137 - 701570 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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