Cluster: C11.bin_11_CGC10
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 6
- Substrate:
- Genome ID: C11.bin_11
- CGC Family ID: CGCFAM_02156
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C11_contig_136 | C11_contig_136_948 | 992822 | 998710 | + | GH43_22 | GH43_27 |
| CAZyme | C11_contig_136 | C11_contig_136_949 | 998714 | 1000624 | + | GH43_29 |
| pfam | C11_contig_136 | C11_contig_136_950 | 1000654 | 1003590 | + | Big_2 | Laminin_G_3 | Laminin_G_3 | aBig_2 |
| CAZyme | C11_contig_136 | C11_contig_136_951 | 1003734 | 1008008 | + | GH146 |
| CAZyme | C11_contig_136 | C11_contig_136_952 | 1008128 | 1012315 | + | GH146 |
| CAZyme | C11_contig_136 | C11_contig_136_953 | 1012516 | 1016811 | + | GH43_22 | GH43_34 |
| CAZyme | C11_contig_136 | C11_contig_136_954 | 1016991 | 1020086 | + | GH43_22 |
| TC | C11_contig_136 | C11_contig_136_955 | 1020283 | 1021344 | + | 3.A.1.2.14 |
| TF | C11_contig_136 | C11_contig_136_956 | 1021362 | 1022981 | + | HTH_AraC | HTH_AraC |
| TC | C11_contig_136 | C11_contig_136_957 | 1022993 | 1024477 | + | 8.A.59.2.1 |
| TC | C11_contig_136 | C11_contig_136_958 | 1024627 | 1025619 | + | 3.A.1.2.1 |
| TC | C11_contig_136 | C11_contig_136_959 | 1025736 | 1027250 | + | 3.A.1.2.23 |
| TC | C11_contig_136 | C11_contig_136_960 | 1027253 | 1028317 | + | 3.A.1.2.14 |
| TC | C11_contig_136 | C11_contig_136_961 | 1028319 | 1029362 | + | 3.A.1.2.14 |
Gene ID: C11_contig_136_948
Type: CAZyme
Location: 992822 - 998710 (+)
Type: CAZyme
Location: 992822 - 998710 (+)
Gene ID: C11_contig_136_949
Type: CAZyme
Location: 998714 - 1000624 (+)
Type: CAZyme
Location: 998714 - 1000624 (+)
Gene ID: C11_contig_136_950
Type: pfam
Location: 1000654 - 1003590 (+)
Type: pfam
Location: 1000654 - 1003590 (+)
Gene ID: C11_contig_136_951
Type: CAZyme
Location: 1003734 - 1008008 (+)
Type: CAZyme
Location: 1003734 - 1008008 (+)
Gene ID: C11_contig_136_952
Type: CAZyme
Location: 1008128 - 1012315 (+)
Type: CAZyme
Location: 1008128 - 1012315 (+)
Gene ID: C11_contig_136_953
Type: CAZyme
Location: 1012516 - 1016811 (+)
Type: CAZyme
Location: 1012516 - 1016811 (+)
Gene ID: C11_contig_136_954
Type: CAZyme
Location: 1016991 - 1020086 (+)
Type: CAZyme
Location: 1016991 - 1020086 (+)
Gene ID: C11_contig_136_955
Type: TC
Location: 1020283 - 1021344 (+)
Type: TC
Location: 1020283 - 1021344 (+)
Gene ID: C11_contig_136_956
Type: TF
Location: 1021362 - 1022981 (+)
Type: TF
Location: 1021362 - 1022981 (+)
Gene ID: C11_contig_136_957
Type: TC
Location: 1022993 - 1024477 (+)
Type: TC
Location: 1022993 - 1024477 (+)
Gene ID: C11_contig_136_958
Type: TC
Location: 1024627 - 1025619 (+)
Type: TC
Location: 1024627 - 1025619 (+)
Gene ID: C11_contig_136_959
Type: TC
Location: 1025736 - 1027250 (+)
Type: TC
Location: 1025736 - 1027250 (+)
Gene ID: C11_contig_136_960
Type: TC
Location: 1027253 - 1028317 (+)
Type: TC
Location: 1027253 - 1028317 (+)
Gene ID: C11_contig_136_961
Type: TC
Location: 1028319 - 1029362 (+)
Type: TC
Location: 1028319 - 1029362 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Dorea_D
Species
Dorea_D sp900543415
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.