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Cluster: C104.bin_14_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C104_contig_418 C104_contig_418_466 545721 546668 + 3.A.1.1.11
TF C104_contig_418 C104_contig_418_467 546747 547643 + HTH_AraC
CAZyme C104_contig_418 C104_contig_418_468 548037 552113 + GH2
CAZyme C104_contig_418 C104_contig_418_469 552198 554339 + GH3
pfam C104_contig_418 C104_contig_418_470 554433 555956 + FGGY_N | FGGY_C
CAZyme C104_contig_418 C104_contig_418_471 556042 559146 - CBM32 | GH95
TF C104_contig_418 C104_contig_418_472 559368 560357 + HTH_AraC | HTH_AraC
pfam C104_contig_418 C104_contig_418_473 560524 561297 - PCMT | Ubie_methyltran | FtsJ | Methyltransf_4 | MTS | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
TC C104_contig_418 C104_contig_418_474 561310 562128 - 3.A.1.15.13
TC C104_contig_418 C104_contig_418_475 562125 562865 - 3.A.1.15.5
Gene ID: C104_contig_418_466
Type: TC
Location: 545721 - 546668 (+)
Gene ID: C104_contig_418_467
Type: TF
Location: 546747 - 547643 (+)
Gene ID: C104_contig_418_468
Type: CAZyme
Location: 548037 - 552113 (+)
Gene ID: C104_contig_418_469
Type: CAZyme
Location: 552198 - 554339 (+)
Gene ID: C104_contig_418_470
Type: pfam
Location: 554433 - 555956 (+)
Gene ID: C104_contig_418_471
Type: CAZyme
Location: 556042 - 559146 (-)
Gene ID: C104_contig_418_472
Type: TF
Location: 559368 - 560357 (+)
Gene ID: C104_contig_418_473
Type: pfam
Location: 560524 - 561297 (-)
Gene ID: C104_contig_418_474
Type: TC
Location: 561310 - 562128 (-)
Gene ID: C104_contig_418_475
Type: TC
Location: 562125 - 562865 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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