Cluster: C104.bin_14_CGC28
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: C104.bin_14
- CGC Family ID: CGCFAM_00526
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C104_contig_418 | C104_contig_418_1784 | 2087328 | 2088209 | + | 3.A.1.32.2 |
| TC | C104_contig_418 | C104_contig_418_1785 | 2088182 | 2089861 | + | 3.A.1.32.2 |
| pfam | C104_contig_418 | C104_contig_418_1786 | 2089858 | 2090565 | + | ECF-ribofla_trS | ECF_trnsprt |
| pfam | C104_contig_418 | C104_contig_418_1787 | 2090620 | 2091750 | - | Glyphos_transf |
| CAZyme | C104_contig_418 | C104_contig_418_1788 | 2091747 | 2092736 | - | GT4 |
| CAZyme | C104_contig_418 | C104_contig_418_1789 | 2092748 | 2093950 | - | GT4 |
Gene ID: C104_contig_418_1784
Type: TC
Location: 2087328 - 2088209 (+)
Type: TC
Location: 2087328 - 2088209 (+)
Gene ID: C104_contig_418_1785
Type: TC
Location: 2088182 - 2089861 (+)
Type: TC
Location: 2088182 - 2089861 (+)
Gene ID: C104_contig_418_1786
Type: pfam
Location: 2089858 - 2090565 (+)
Type: pfam
Location: 2089858 - 2090565 (+)
Gene ID: C104_contig_418_1787
Type: pfam
Location: 2090620 - 2091750 (-)
Type: pfam
Location: 2090620 - 2091750 (-)
Gene ID: C104_contig_418_1788
Type: CAZyme
Location: 2091747 - 2092736 (-)
Type: CAZyme
Location: 2091747 - 2092736 (-)
Gene ID: C104_contig_418_1789
Type: CAZyme
Location: 2092748 - 2093950 (-)
Type: CAZyme
Location: 2092748 - 2093950 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1474
Species
UMGS1474 sp900547105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.