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Cluster: C104.bin_14_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C104_contig_418 C104_contig_418_1526 1782432 1783133 - 3.A.1.125.2
TF C104_contig_418 C104_contig_418_1527 1783147 1783542 - MarR
pfam C104_contig_418 C104_contig_418_1528 1783606 1783779 - FeoB_associated
TC C104_contig_418 C104_contig_418_1529 1783820 1786309 - 9.A.8.1.1
STP C104_contig_418 C104_contig_418_1530 1786393 1786614 - FeoA
STP C104_contig_418 C104_contig_418_1531 1786668 1786880 - FeoA
CAZyme C104_contig_418 C104_contig_418_1532 1787259 1790870 + GH2
TC C104_contig_418 C104_contig_418_1533 1791138 1792970 + 2.A.58.2.2
Gene ID: C104_contig_418_1526
Type: TC
Location: 1782432 - 1783133 (-)
Gene ID: C104_contig_418_1527
Type: TF
Location: 1783147 - 1783542 (-)
Gene ID: C104_contig_418_1528
Type: pfam
Location: 1783606 - 1783779 (-)
Gene ID: C104_contig_418_1529
Type: TC
Location: 1783820 - 1786309 (-)
Gene ID: C104_contig_418_1530
Type: STP
Location: 1786393 - 1786614 (-)
Gene ID: C104_contig_418_1531
Type: STP
Location: 1786668 - 1786880 (-)
Gene ID: C104_contig_418_1532
Type: CAZyme
Location: 1787259 - 1790870 (+)
Gene ID: C104_contig_418_1533
Type: TC
Location: 1791138 - 1792970 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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