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Cluster: C104.CMAG_5_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C104_contig_3749 C104_contig_3749_1246 1463049 1465487 + 3.A.9.1.2
pfam C104_contig_3749 C104_contig_3749_1247 1465487 1466278 + AP_endonuc_2
pfam C104_contig_3749 C104_contig_3749_1248 1466289 1467722 + PGI
CAZyme C104_contig_3749 C104_contig_3749_1249 1467742 1469601 + CBM48 | GH13_9
pfam C104_contig_3749 C104_contig_3749_1250 1469634 1470824 + NTP_transferase | Hexapep_GlmU
pfam C104_contig_3749 C104_contig_3749_1251 1470836 1471948 + NTP_transferase | Hexapep_GlmU
CAZyme C104_contig_3749 C104_contig_3749_1252 1471972 1473660 + GT5
CAZyme C104_contig_3749 C104_contig_3749_1253 1473690 1476125 + GT35
CAZyme C104_contig_3749 C104_contig_3749_1254 1476133 1477935 + GH13_39
Gene ID: C104_contig_3749_1246
Type: TC
Location: 1463049 - 1465487 (+)
Gene ID: C104_contig_3749_1247
Type: pfam
Location: 1465487 - 1466278 (+)
Gene ID: C104_contig_3749_1248
Type: pfam
Location: 1466289 - 1467722 (+)
Gene ID: C104_contig_3749_1249
Type: CAZyme
Location: 1467742 - 1469601 (+)
Gene ID: C104_contig_3749_1250
Type: pfam
Location: 1469634 - 1470824 (+)
Gene ID: C104_contig_3749_1251
Type: pfam
Location: 1470836 - 1471948 (+)
Gene ID: C104_contig_3749_1252
Type: CAZyme
Location: 1471972 - 1473660 (+)
Gene ID: C104_contig_3749_1253
Type: CAZyme
Location: 1473690 - 1476125 (+)
Gene ID: C104_contig_3749_1254
Type: CAZyme
Location: 1476133 - 1477935 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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