Cluster: C103.bin_1_CGC26
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: C103.bin_1
- CGC Family ID: CGCFAM_07872
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C103_contig_1268 | C103_contig_1268_2385 | 2415528 | 2416823 | - | 2.A.1.21.22 |
| pfam | C103_contig_1268 | C103_contig_1268_2386 | 2417243 | 2417875 | + | Dockerin_1 |
| TF | C103_contig_1268 | C103_contig_1268_2387 | 2418192 | 2418983 | - | HTH_AraC |
| CAZyme | C103_contig_1268 | C103_contig_1268_2388 | 2419130 | 2421478 | + | CBM4 | GH9 |
Gene ID: C103_contig_1268_2385
Type: TC
Location: 2415528 - 2416823 (-)
Type: TC
Location: 2415528 - 2416823 (-)
Gene ID: C103_contig_1268_2386
Type: pfam
Location: 2417243 - 2417875 (+)
Type: pfam
Location: 2417243 - 2417875 (+)
Gene ID: C103_contig_1268_2387
Type: TF
Location: 2418192 - 2418983 (-)
Type: TF
Location: 2418192 - 2418983 (-)
Gene ID: C103_contig_1268_2388
Type: CAZyme
Location: 2419130 - 2421478 (+)
Type: CAZyme
Location: 2419130 - 2421478 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Porcipelethomonas
Species
Porcipelethomonas sp900538575
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.