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Cluster: C103.bin_1_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C103_contig_1268 C103_contig_1268_1577 1566023 1566616 + 2.A.115.2.14
CAZyme C103_contig_1268 C103_contig_1268_1578 1566760 1568574 + GH5_4
TC C103_contig_1268 C103_contig_1268_1579 1568632 1569984 - 2.A.22.5.3
TF C103_contig_1268 C103_contig_1268_1580 1570346 1571095 + HTH_DeoR
STP C103_contig_1268 C103_contig_1268_1581 1571092 1572006 + PfkB
TC C103_contig_1268 C103_contig_1268_1582 1572025 1573935 + 4.A.2.1.20
STP C103_contig_1268 C103_contig_1268_1583 1573953 1574216 + PTS-HPr
TC C103_contig_1268 C103_contig_1268_1584 1574282 1575988 + 8.A.7.1.1
Gene ID: C103_contig_1268_1577
Type: TC
Location: 1566023 - 1566616 (+)
Gene ID: C103_contig_1268_1578
Type: CAZyme
Location: 1566760 - 1568574 (+)
Gene ID: C103_contig_1268_1579
Type: TC
Location: 1568632 - 1569984 (-)
Gene ID: C103_contig_1268_1580
Type: TF
Location: 1570346 - 1571095 (+)
Gene ID: C103_contig_1268_1581
Type: STP
Location: 1571092 - 1572006 (+)
Gene ID: C103_contig_1268_1582
Type: TC
Location: 1572025 - 1573935 (+)
Gene ID: C103_contig_1268_1583
Type: STP
Location: 1573953 - 1574216 (+)
Gene ID: C103_contig_1268_1584
Type: TC
Location: 1574282 - 1575988 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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