Cluster: C103.bin_1_CGC10
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 1
- Substrate:
- Genome ID: C103.bin_1
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C103_contig_1268 | C103_contig_1268_1231 | 1198387 | 1199355 | - | 3.A.1.2.6 |
| pfam | C103_contig_1268 | C103_contig_1268_1232 | 1199371 | 1200279 | - | ROK |
| pfam | C103_contig_1268 | C103_contig_1268_1233 | 1200257 | 1200967 | - | Ribul_P_3_epim |
| TC | C103_contig_1268 | C103_contig_1268_1234 | 1200990 | 1201985 | - | 3.A.1.2.6 |
| TC | C103_contig_1268 | C103_contig_1268_1235 | 1202016 | 1203545 | - | 3.A.1.2.6 |
| TF | C103_contig_1268 | C103_contig_1268_1236 | 1203669 | 1204697 | - | LacI |
| pfam | C103_contig_1268 | C103_contig_1268_1237 | 1205085 | 1205531 | - | Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10 |
| TC | C103_contig_1268 | C103_contig_1268_1238 | 1205662 | 1206465 | - | 9.B.18.1.2 |
| TC | C103_contig_1268 | C103_contig_1268_1239 | 1206735 | 1209470 | - | 3.A.5.1.3 |
| CAZyme | C103_contig_1268 | C103_contig_1268_1240 | 1209670 | 1211547 | - | GH5_46 |
| STP | C103_contig_1268 | C103_contig_1268_1241 | 1211547 | 1212182 | - | HhH-GPD |
| STP | C103_contig_1268 | C103_contig_1268_1242 | 1212175 | 1212891 | - | NUDIX |
| TC | C103_contig_1268 | C103_contig_1268_1243 | 1213061 | 1214629 | + | 2.A.21.2.3 |
Gene ID: C103_contig_1268_1231
Type: TC
Location: 1198387 - 1199355 (-)
Type: TC
Location: 1198387 - 1199355 (-)
Gene ID: C103_contig_1268_1232
Type: pfam
Location: 1199371 - 1200279 (-)
Type: pfam
Location: 1199371 - 1200279 (-)
Gene ID: C103_contig_1268_1233
Type: pfam
Location: 1200257 - 1200967 (-)
Type: pfam
Location: 1200257 - 1200967 (-)
Gene ID: C103_contig_1268_1234
Type: TC
Location: 1200990 - 1201985 (-)
Type: TC
Location: 1200990 - 1201985 (-)
Gene ID: C103_contig_1268_1235
Type: TC
Location: 1202016 - 1203545 (-)
Type: TC
Location: 1202016 - 1203545 (-)
Gene ID: C103_contig_1268_1236
Type: TF
Location: 1203669 - 1204697 (-)
Type: TF
Location: 1203669 - 1204697 (-)
Gene ID: C103_contig_1268_1237
Type: pfam
Location: 1205085 - 1205531 (-)
Type: pfam
Location: 1205085 - 1205531 (-)
Gene ID: C103_contig_1268_1238
Type: TC
Location: 1205662 - 1206465 (-)
Type: TC
Location: 1205662 - 1206465 (-)
Gene ID: C103_contig_1268_1239
Type: TC
Location: 1206735 - 1209470 (-)
Type: TC
Location: 1206735 - 1209470 (-)
Gene ID: C103_contig_1268_1240
Type: CAZyme
Location: 1209670 - 1211547 (-)
Type: CAZyme
Location: 1209670 - 1211547 (-)
Gene ID: C103_contig_1268_1241
Type: STP
Location: 1211547 - 1212182 (-)
Type: STP
Location: 1211547 - 1212182 (-)
Gene ID: C103_contig_1268_1242
Type: STP
Location: 1212175 - 1212891 (-)
Type: STP
Location: 1212175 - 1212891 (-)
Gene ID: C103_contig_1268_1243
Type: TC
Location: 1213061 - 1214629 (+)
Type: TC
Location: 1213061 - 1214629 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Porcipelethomonas
Species
Porcipelethomonas sp900538575
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.