Cluster: BrooksB_2017_SRR5405980_bin.9_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: BrooksB_2017_SRR5405980_bin.9
- CGC Family ID: CGCFAM_01839
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BrooksB_2017_SRR5405980_bin.9_k119_923 | BrooksB_2017_SRR5405980_bin.9_k119_923_41 | 40479 | 41729 | - | 2.A.27.1.1 |
| pfam | BrooksB_2017_SRR5405980_bin.9_k119_923 | BrooksB_2017_SRR5405980_bin.9_k119_923_42 | 42201 | 43292 | - | Tubulin | FtsZ_C |
| pfam | BrooksB_2017_SRR5405980_bin.9_k119_923 | BrooksB_2017_SRR5405980_bin.9_k119_923_43 | 43410 | 44261 | - | POTRA_1 |
| CAZyme | BrooksB_2017_SRR5405980_bin.9_k119_923 | BrooksB_2017_SRR5405980_bin.9_k119_923_44 | 44266 | 45345 | - | GT28 |
| TC | BrooksB_2017_SRR5405980_bin.9_k119_923 | BrooksB_2017_SRR5405980_bin.9_k119_923_45 | 45342 | 46448 | - | 2.A.103.1.3 |
| pfam | BrooksB_2017_SRR5405980_bin.9_k119_923 | BrooksB_2017_SRR5405980_bin.9_k119_923_46 | 46449 | 47768 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | BrooksB_2017_SRR5405980_bin.9_k119_923 | BrooksB_2017_SRR5405980_bin.9_k119_923_47 | 47779 | 48729 | - | 9.B.146.1.6 |
Gene ID: BrooksB_2017_SRR5405980_bin.9_k119_923_41
Type: TC
Location: 40479 - 41729 (-)
Type: TC
Location: 40479 - 41729 (-)
Gene ID: BrooksB_2017_SRR5405980_bin.9_k119_923_42
Type: pfam
Location: 42201 - 43292 (-)
Type: pfam
Location: 42201 - 43292 (-)
Gene ID: BrooksB_2017_SRR5405980_bin.9_k119_923_43
Type: pfam
Location: 43410 - 44261 (-)
Type: pfam
Location: 43410 - 44261 (-)
Gene ID: BrooksB_2017_SRR5405980_bin.9_k119_923_44
Type: CAZyme
Location: 44266 - 45345 (-)
Type: CAZyme
Location: 44266 - 45345 (-)
Gene ID: BrooksB_2017_SRR5405980_bin.9_k119_923_45
Type: TC
Location: 45342 - 46448 (-)
Type: TC
Location: 45342 - 46448 (-)
Gene ID: BrooksB_2017_SRR5405980_bin.9_k119_923_46
Type: pfam
Location: 46449 - 47768 (-)
Type: pfam
Location: 46449 - 47768 (-)
Gene ID: BrooksB_2017_SRR5405980_bin.9_k119_923_47
Type: TC
Location: 47779 - 48729 (-)
Type: TC
Location: 47779 - 48729 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Peptoniphilus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.