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Cluster: BrooksB_2017_SRR5405927_bin.2_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC BrooksB_2017_SRR5405927_bin.2_k119_2878 BrooksB_2017_SRR5405927_bin.2_k119_2878_110 120226 120978 - 2.A.89.3.2
STP BrooksB_2017_SRR5405927_bin.2_k119_2878 BrooksB_2017_SRR5405927_bin.2_k119_2878_111 121416 122387 - PfkB
TF BrooksB_2017_SRR5405927_bin.2_k119_2878 BrooksB_2017_SRR5405927_bin.2_k119_2878_112 122415 123407 - LacI
TC BrooksB_2017_SRR5405927_bin.2_k119_2878 BrooksB_2017_SRR5405927_bin.2_k119_2878_113 123439 124836 - 2.A.1.3.37
sulfatase BrooksB_2017_SRR5405927_bin.2_k119_2878 BrooksB_2017_SRR5405927_bin.2_k119_2878_114 124836 125780 - S1_46
CAZyme BrooksB_2017_SRR5405927_bin.2_k119_2878 BrooksB_2017_SRR5405927_bin.2_k119_2878_115 126013 127719 - GH136
Gene ID: BrooksB_2017_SRR5405927_bin.2_k119_2878_110
Type: TC
Location: 120226 - 120978 (-)
Gene ID: BrooksB_2017_SRR5405927_bin.2_k119_2878_111
Type: STP
Location: 121416 - 122387 (-)
Gene ID: BrooksB_2017_SRR5405927_bin.2_k119_2878_112
Type: TF
Location: 122415 - 123407 (-)
Gene ID: BrooksB_2017_SRR5405927_bin.2_k119_2878_113
Type: TC
Location: 123439 - 124836 (-)
Gene ID: BrooksB_2017_SRR5405927_bin.2_k119_2878_114
Type: sulfatase
Location: 124836 - 125780 (-)
Gene ID: BrooksB_2017_SRR5405927_bin.2_k119_2878_115
Type: CAZyme
Location: 126013 - 127719 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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