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Cluster: BrooksB_2017_SRR5405927_bin.2_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme BrooksB_2017_SRR5405927_bin.2_k119_2836 BrooksB_2017_SRR5405927_bin.2_k119_2836_66 82807 83961 + GT4
pfam BrooksB_2017_SRR5405927_bin.2_k119_2836 BrooksB_2017_SRR5405927_bin.2_k119_2836_67 84101 85177 + Epimerase_2
TC BrooksB_2017_SRR5405927_bin.2_k119_2836 BrooksB_2017_SRR5405927_bin.2_k119_2836_68 85266 86543 + 2.A.66.2.15
CAZyme BrooksB_2017_SRR5405927_bin.2_k119_2836 BrooksB_2017_SRR5405927_bin.2_k119_2836_69 86646 87887 - GT4
pfam BrooksB_2017_SRR5405927_bin.2_k119_2836 BrooksB_2017_SRR5405927_bin.2_k119_2836_70 87985 89964 - DUF6541
CAZyme BrooksB_2017_SRR5405927_bin.2_k119_2836 BrooksB_2017_SRR5405927_bin.2_k119_2836_71 90029 91201 - GT4
Gene ID: BrooksB_2017_SRR5405927_bin.2_k119_2836_66
Type: CAZyme
Location: 82807 - 83961 (+)
Gene ID: BrooksB_2017_SRR5405927_bin.2_k119_2836_67
Type: pfam
Location: 84101 - 85177 (+)
Gene ID: BrooksB_2017_SRR5405927_bin.2_k119_2836_68
Type: TC
Location: 85266 - 86543 (+)
Gene ID: BrooksB_2017_SRR5405927_bin.2_k119_2836_69
Type: CAZyme
Location: 86646 - 87887 (-)
Gene ID: BrooksB_2017_SRR5405927_bin.2_k119_2836_70
Type: pfam
Location: 87985 - 89964 (-)
Gene ID: BrooksB_2017_SRR5405927_bin.2_k119_2836_71
Type: CAZyme
Location: 90029 - 91201 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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