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Cluster: BrooksB_2017_SRR5405927_bin.2_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC BrooksB_2017_SRR5405927_bin.2_k119_3356 BrooksB_2017_SRR5405927_bin.2_k119_3356_241 292179 293714 + 3.A.1.2.19
TC BrooksB_2017_SRR5405927_bin.2_k119_3356 BrooksB_2017_SRR5405927_bin.2_k119_3356_242 293707 294669 + 3.A.1.2.15
CAZyme BrooksB_2017_SRR5405927_bin.2_k119_3356 BrooksB_2017_SRR5405927_bin.2_k119_3356_243 294726 296777 + GH35
NULL(UNKNOWN) BrooksB_2017_SRR5405927_bin.2_k119_3356 BrooksB_2017_SRR5405927_bin.2_k119_3356_244 296789 297568 + NULL(UNKNOWN)
[View Structural Homologs]
TF BrooksB_2017_SRR5405927_bin.2_k119_3356 BrooksB_2017_SRR5405927_bin.2_k119_3356_245 297732 298775 - LacI
TC BrooksB_2017_SRR5405927_bin.2_k119_3356 BrooksB_2017_SRR5405927_bin.2_k119_3356_246 298947 301016 + 2.A.15.1.4
NULL(UNKNOWN) BrooksB_2017_SRR5405927_bin.2_k119_3356 BrooksB_2017_SRR5405927_bin.2_k119_3356_247 301208 301576 + NULL(UNKNOWN)
[View Structural Homologs]
TC BrooksB_2017_SRR5405927_bin.2_k119_3356 BrooksB_2017_SRR5405927_bin.2_k119_3356_248 301610 303874 - 3.A.3.5.31
pfam BrooksB_2017_SRR5405927_bin.2_k119_3356 BrooksB_2017_SRR5405927_bin.2_k119_3356_249 304135 306243 - DUF6541
TC BrooksB_2017_SRR5405927_bin.2_k119_3356 BrooksB_2017_SRR5405927_bin.2_k119_3356_250 306468 308915 - 4.A.2.1.17
pfam BrooksB_2017_SRR5405927_bin.2_k119_3356 BrooksB_2017_SRR5405927_bin.2_k119_3356_251 308937 309548 - Dak2
pfam BrooksB_2017_SRR5405927_bin.2_k119_3356 BrooksB_2017_SRR5405927_bin.2_k119_3356_252 309551 310552 - Dak1
TC BrooksB_2017_SRR5405927_bin.2_k119_3356 BrooksB_2017_SRR5405927_bin.2_k119_3356_253 310620 312773 - 9.B.97.5.1
TC BrooksB_2017_SRR5405927_bin.2_k119_3356 BrooksB_2017_SRR5405927_bin.2_k119_3356_254 313019 314434 - 2.A.1.24.5
Gene ID: BrooksB_2017_SRR5405927_bin.2_k119_3356_241
Type: TC
Location: 292179 - 293714 (+)
Gene ID: BrooksB_2017_SRR5405927_bin.2_k119_3356_242
Type: TC
Location: 293707 - 294669 (+)
Gene ID: BrooksB_2017_SRR5405927_bin.2_k119_3356_243
Type: CAZyme
Location: 294726 - 296777 (+)
Gene ID: BrooksB_2017_SRR5405927_bin.2_k119_3356_244
Type:
Location: 296789 - 297568 (+)
Gene ID: BrooksB_2017_SRR5405927_bin.2_k119_3356_245
Type: TF
Location: 297732 - 298775 (-)
Gene ID: BrooksB_2017_SRR5405927_bin.2_k119_3356_246
Type: TC
Location: 298947 - 301016 (+)
Gene ID: BrooksB_2017_SRR5405927_bin.2_k119_3356_247
Type:
Location: 301208 - 301576 (+)
Gene ID: BrooksB_2017_SRR5405927_bin.2_k119_3356_248
Type: TC
Location: 301610 - 303874 (-)
Gene ID: BrooksB_2017_SRR5405927_bin.2_k119_3356_249
Type: pfam
Location: 304135 - 306243 (-)
Gene ID: BrooksB_2017_SRR5405927_bin.2_k119_3356_250
Type: TC
Location: 306468 - 308915 (-)
Gene ID: BrooksB_2017_SRR5405927_bin.2_k119_3356_251
Type: pfam
Location: 308937 - 309548 (-)
Gene ID: BrooksB_2017_SRR5405927_bin.2_k119_3356_252
Type: pfam
Location: 309551 - 310552 (-)
Gene ID: BrooksB_2017_SRR5405927_bin.2_k119_3356_253
Type: TC
Location: 310620 - 312773 (-)
Gene ID: BrooksB_2017_SRR5405927_bin.2_k119_3356_254
Type: TC
Location: 313019 - 314434 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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