Cluster: BrooksB_2017_SRR5405894_bin.8_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: BrooksB_2017_SRR5405894_bin.8
- CGC Family ID: CGCFAM_07703
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BrooksB_2017_SRR5405894_bin.8_k119_899 | BrooksB_2017_SRR5405894_bin.8_k119_899_57 | 53281 | 54186 | + | 3.A.1.1.20 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_899 | BrooksB_2017_SRR5405894_bin.8_k119_899_58 | 54201 | 55037 | + | 3.A.1.1.6 |
| NULL(UNKNOWN) | BrooksB_2017_SRR5405894_bin.8_k119_899 | BrooksB_2017_SRR5405894_bin.8_k119_899_59 | 55042 | 55452 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_899 | BrooksB_2017_SRR5405894_bin.8_k119_899_60 | 55472 | 57274 | + | GH2 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_899 | BrooksB_2017_SRR5405894_bin.8_k119_899_61 | 57392 | 58510 | + | 3.A.1.1.28 |
| NULL(UNKNOWN) | BrooksB_2017_SRR5405894_bin.8_k119_899 | BrooksB_2017_SRR5405894_bin.8_k119_899_62 | 58751 | 59155 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_899 | BrooksB_2017_SRR5405894_bin.8_k119_899_63 | 59298 | 61013 | + | 3.A.1.106.2 |
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_899_57
Type: TC
Location: 53281 - 54186 (+)
Type: TC
Location: 53281 - 54186 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_899_58
Type: TC
Location: 54201 - 55037 (+)
Type: TC
Location: 54201 - 55037 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_899_59
Type:
Location: 55042 - 55452 (+)
Type:
Location: 55042 - 55452 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_899_60
Type: CAZyme
Location: 55472 - 57274 (+)
Type: CAZyme
Location: 55472 - 57274 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_899_61
Type: TC
Location: 57392 - 58510 (+)
Type: TC
Location: 57392 - 58510 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_899_62
Type:
Location: 58751 - 59155 (+)
Type:
Location: 58751 - 59155 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_899_63
Type: TC
Location: 59298 - 61013 (+)
Type: TC
Location: 59298 - 61013 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.