Cluster: BrooksB_2017_SRR5405894_bin.8_CGC80
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: BrooksB_2017_SRR5405894_bin.8
- CGC Family ID: CGCFAM_05180
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_7103 | BrooksB_2017_SRR5405894_bin.8_k119_7103_20 | 30646 | 32076 | - | GH1 |
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_7103 | BrooksB_2017_SRR5405894_bin.8_k119_7103_21 | 32094 | 33485 | - | GH4 |
| TF | BrooksB_2017_SRR5405894_bin.8_k119_7103 | BrooksB_2017_SRR5405894_bin.8_k119_7103_22 | 33704 | 34621 | + | HTH_6 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_7103 | BrooksB_2017_SRR5405894_bin.8_k119_7103_23 | 34701 | 36608 | - | 4.A.1.2.6 |
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_7103_20
Type: CAZyme
Location: 30646 - 32076 (-)
Type: CAZyme
Location: 30646 - 32076 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_7103_21
Type: CAZyme
Location: 32094 - 33485 (-)
Type: CAZyme
Location: 32094 - 33485 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_7103_22
Type: TF
Location: 33704 - 34621 (+)
Type: TF
Location: 33704 - 34621 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_7103_23
Type: TC
Location: 34701 - 36608 (-)
Type: TC
Location: 34701 - 36608 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.