Cluster: BrooksB_2017_SRR5405894_bin.8_CGC78
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: BrooksB_2017_SRR5405894_bin.8
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BrooksB_2017_SRR5405894_bin.8_k119_6845 | BrooksB_2017_SRR5405894_bin.8_k119_6845_19 | 19472 | 20371 | + | 3.A.1.1.20 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_6845 | BrooksB_2017_SRR5405894_bin.8_k119_6845_20 | 20371 | 21207 | + | 3.A.1.1.18 |
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_6845 | BrooksB_2017_SRR5405894_bin.8_k119_6845_21 | 21235 | 22578 | + | GH172 |
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_6845 | BrooksB_2017_SRR5405894_bin.8_k119_6845_22 | 22652 | 24127 | + | GH32 |
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6845_19
Type: TC
Location: 19472 - 20371 (+)
Type: TC
Location: 19472 - 20371 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6845_20
Type: TC
Location: 20371 - 21207 (+)
Type: TC
Location: 20371 - 21207 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6845_21
Type: CAZyme
Location: 21235 - 22578 (+)
Type: CAZyme
Location: 21235 - 22578 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6845_22
Type: CAZyme
Location: 22652 - 24127 (+)
Type: CAZyme
Location: 22652 - 24127 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.