Cluster: BrooksB_2017_SRR5405894_bin.8_CGC77
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 2
- Substrate: fructan
- Genome ID: BrooksB_2017_SRR5405894_bin.8
- CGC Family ID: CGCFAM_00926
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BrooksB_2017_SRR5405894_bin.8_k119_6845 | BrooksB_2017_SRR5405894_bin.8_k119_6845_7 | 5697 | 6998 | + | 3.A.1.1.17 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_6845 | BrooksB_2017_SRR5405894_bin.8_k119_6845_8 | 7022 | 7909 | + | 3.A.1.1.37 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_6845 | BrooksB_2017_SRR5405894_bin.8_k119_6845_9 | 7923 | 8753 | + | 3.A.1.1.25 |
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_6845 | BrooksB_2017_SRR5405894_bin.8_k119_6845_10 | 8818 | 10182 | + | GH91 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_6845 | BrooksB_2017_SRR5405894_bin.8_k119_6845_11 | 10247 | 11359 | + | 3.A.1.1.20 |
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_6845 | BrooksB_2017_SRR5405894_bin.8_k119_6845_12 | 11403 | 12902 | + | GH32 |
| STP | BrooksB_2017_SRR5405894_bin.8_k119_6845 | BrooksB_2017_SRR5405894_bin.8_k119_6845_13 | 12958 | 13929 | + | PfkB |
| TF | BrooksB_2017_SRR5405894_bin.8_k119_6845 | BrooksB_2017_SRR5405894_bin.8_k119_6845_14 | 14141 | 15004 | + | HTH_8 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_6845 | BrooksB_2017_SRR5405894_bin.8_k119_6845_15 | 15127 | 16236 | + | 3.A.1.1.28 |
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6845_7
Type: TC
Location: 5697 - 6998 (+)
Type: TC
Location: 5697 - 6998 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6845_8
Type: TC
Location: 7022 - 7909 (+)
Type: TC
Location: 7022 - 7909 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6845_9
Type: TC
Location: 7923 - 8753 (+)
Type: TC
Location: 7923 - 8753 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6845_10
Type: CAZyme
Location: 8818 - 10182 (+)
Type: CAZyme
Location: 8818 - 10182 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6845_11
Type: TC
Location: 10247 - 11359 (+)
Type: TC
Location: 10247 - 11359 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6845_12
Type: CAZyme
Location: 11403 - 12902 (+)
Type: CAZyme
Location: 11403 - 12902 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6845_13
Type: STP
Location: 12958 - 13929 (+)
Type: STP
Location: 12958 - 13929 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6845_14
Type: TF
Location: 14141 - 15004 (+)
Type: TF
Location: 14141 - 15004 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6845_15
Type: TC
Location: 15127 - 16236 (+)
Type: TC
Location: 15127 - 16236 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.