Cluster: BrooksB_2017_SRR5405894_bin.8_CGC75
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: BrooksB_2017_SRR5405894_bin.8
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BrooksB_2017_SRR5405894_bin.8_k119_6814 | BrooksB_2017_SRR5405894_bin.8_k119_6814_58 | 56888 | 58102 | - | 3.A.1.122.3 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_6814 | BrooksB_2017_SRR5405894_bin.8_k119_6814_59 | 58092 | 58778 | - | 3.A.1.122.3 |
| NULL(UNKNOWN) | BrooksB_2017_SRR5405894_bin.8_k119_6814 | BrooksB_2017_SRR5405894_bin.8_k119_6814_60 | 58775 | 59593 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | BrooksB_2017_SRR5405894_bin.8_k119_6814 | BrooksB_2017_SRR5405894_bin.8_k119_6814_61 | 59824 | 61719 | - | Pyr_redox_2 |
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_6814 | BrooksB_2017_SRR5405894_bin.8_k119_6814_62 | 61796 | 64402 | - | CBM67 | GH78 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_6814 | BrooksB_2017_SRR5405894_bin.8_k119_6814_63 | 64478 | 65830 | - | 4.A.3.2.8 |
| TF | BrooksB_2017_SRR5405894_bin.8_k119_6814 | BrooksB_2017_SRR5405894_bin.8_k119_6814_64 | 66046 | 67059 | + | 0035607 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_6814 | BrooksB_2017_SRR5405894_bin.8_k119_6814_65 | 67516 | 68178 | - | 3.A.1.122.2 |
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6814_58
Type: TC
Location: 56888 - 58102 (-)
Type: TC
Location: 56888 - 58102 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6814_59
Type: TC
Location: 58092 - 58778 (-)
Type: TC
Location: 58092 - 58778 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6814_60
Type:
Location: 58775 - 59593 (-)
Type:
Location: 58775 - 59593 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6814_61
Type: STP
Location: 59824 - 61719 (-)
Type: STP
Location: 59824 - 61719 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6814_62
Type: CAZyme
Location: 61796 - 64402 (-)
Type: CAZyme
Location: 61796 - 64402 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6814_63
Type: TC
Location: 64478 - 65830 (-)
Type: TC
Location: 64478 - 65830 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6814_64
Type: TF
Location: 66046 - 67059 (+)
Type: TF
Location: 66046 - 67059 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6814_65
Type: TC
Location: 67516 - 68178 (-)
Type: TC
Location: 67516 - 68178 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.