Cluster: BrooksB_2017_SRR5405894_bin.8_CGC73
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: BrooksB_2017_SRR5405894_bin.8
- CGC Family ID: CGCFAM_00057
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BrooksB_2017_SRR5405894_bin.8_k119_6777 | BrooksB_2017_SRR5405894_bin.8_k119_6777_112 | 113837 | 115666 | + | 1.A.33.1.4 |
| pfam | BrooksB_2017_SRR5405894_bin.8_k119_6777 | BrooksB_2017_SRR5405894_bin.8_k119_6777_113 | 115816 | 116976 | + | DnaJ | DnaJ_CXXCXGXG | DnaJ_C |
| pfam | BrooksB_2017_SRR5405894_bin.8_k119_6777 | BrooksB_2017_SRR5405894_bin.8_k119_6777_114 | 117066 | 118055 | + | PRiA4_ORF3 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_6777 | BrooksB_2017_SRR5405894_bin.8_k119_6777_115 | 118158 | 120737 | - | 2.A.1.3.35 |
| peptidase | BrooksB_2017_SRR5405894_bin.8_k119_6777 | BrooksB_2017_SRR5405894_bin.8_k119_6777_116 | 120742 | 121464 | - | S33.UPW |
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_6777 | BrooksB_2017_SRR5405894_bin.8_k119_6777_117 | 121649 | 122284 | + | GH23 |
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6777_112
Type: TC
Location: 113837 - 115666 (+)
Type: TC
Location: 113837 - 115666 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6777_113
Type: pfam
Location: 115816 - 116976 (+)
Type: pfam
Location: 115816 - 116976 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6777_114
Type: pfam
Location: 117066 - 118055 (+)
Type: pfam
Location: 117066 - 118055 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6777_115
Type: TC
Location: 118158 - 120737 (-)
Type: TC
Location: 118158 - 120737 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6777_116
Type: peptidase
Location: 120742 - 121464 (-)
Type: peptidase
Location: 120742 - 121464 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6777_117
Type: CAZyme
Location: 121649 - 122284 (+)
Type: CAZyme
Location: 121649 - 122284 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.