Cluster: BrooksB_2017_SRR5405894_bin.8_CGC72
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: BrooksB_2017_SRR5405894_bin.8
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BrooksB_2017_SRR5405894_bin.8_k119_6777 | BrooksB_2017_SRR5405894_bin.8_k119_6777_41 | 45495 | 46943 | - | 8.A.59.2.1 |
| STP | BrooksB_2017_SRR5405894_bin.8_k119_6777 | BrooksB_2017_SRR5405894_bin.8_k119_6777_42 | 46946 | 47914 | - | Peripla_BP_1 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_6777 | BrooksB_2017_SRR5405894_bin.8_k119_6777_43 | 48160 | 49173 | + | 3.A.1.2.14 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_6777 | BrooksB_2017_SRR5405894_bin.8_k119_6777_44 | 49247 | 50749 | + | 3.A.1.2.14 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_6777 | BrooksB_2017_SRR5405894_bin.8_k119_6777_45 | 50749 | 51765 | + | 3.A.1.2.14 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_6777 | BrooksB_2017_SRR5405894_bin.8_k119_6777_46 | 51755 | 52777 | + | 3.A.1.2.14 |
| NULL(UNKNOWN) | BrooksB_2017_SRR5405894_bin.8_k119_6777 | BrooksB_2017_SRR5405894_bin.8_k119_6777_47 | 52968 | 54065 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_6777 | BrooksB_2017_SRR5405894_bin.8_k119_6777_48 | 54248 | 55864 | + | 4.A.1.1.8 |
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_6777 | BrooksB_2017_SRR5405894_bin.8_k119_6777_49 | 55867 | 57198 | + | GH4 |
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6777_41
Type: TC
Location: 45495 - 46943 (-)
Type: TC
Location: 45495 - 46943 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6777_42
Type: STP
Location: 46946 - 47914 (-)
Type: STP
Location: 46946 - 47914 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6777_43
Type: TC
Location: 48160 - 49173 (+)
Type: TC
Location: 48160 - 49173 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6777_44
Type: TC
Location: 49247 - 50749 (+)
Type: TC
Location: 49247 - 50749 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6777_45
Type: TC
Location: 50749 - 51765 (+)
Type: TC
Location: 50749 - 51765 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6777_46
Type: TC
Location: 51755 - 52777 (+)
Type: TC
Location: 51755 - 52777 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6777_47
Type:
Location: 52968 - 54065 (+)
Type:
Location: 52968 - 54065 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6777_48
Type: TC
Location: 54248 - 55864 (+)
Type: TC
Location: 54248 - 55864 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6777_49
Type: CAZyme
Location: 55867 - 57198 (+)
Type: CAZyme
Location: 55867 - 57198 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.