Cluster: BrooksB_2017_SRR5405894_bin.8_CGC69
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate: chitin
- Genome ID: BrooksB_2017_SRR5405894_bin.8
- CGC Family ID: CGCFAM_06438
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BrooksB_2017_SRR5405894_bin.8_k119_6759 | BrooksB_2017_SRR5405894_bin.8_k119_6759_57 | 58640 | 59812 | + | 3.A.18.1.1 |
| TF | BrooksB_2017_SRR5405894_bin.8_k119_6759 | BrooksB_2017_SRR5405894_bin.8_k119_6759_58 | 60291 | 61079 | + | HTH_6 |
| pfam | BrooksB_2017_SRR5405894_bin.8_k119_6759 | BrooksB_2017_SRR5405894_bin.8_k119_6759_59 | 61238 | 62002 | - | YdjC |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_6759 | BrooksB_2017_SRR5405894_bin.8_k119_6759_60 | 62166 | 63572 | + | 4.A.3.2.6 |
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_6759 | BrooksB_2017_SRR5405894_bin.8_k119_6759_61 | 63607 | 64947 | + | GH4 |
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6759_57
Type: TC
Location: 58640 - 59812 (+)
Type: TC
Location: 58640 - 59812 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6759_58
Type: TF
Location: 60291 - 61079 (+)
Type: TF
Location: 60291 - 61079 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6759_59
Type: pfam
Location: 61238 - 62002 (-)
Type: pfam
Location: 61238 - 62002 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6759_60
Type: TC
Location: 62166 - 63572 (+)
Type: TC
Location: 62166 - 63572 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6759_61
Type: CAZyme
Location: 63607 - 64947 (+)
Type: CAZyme
Location: 63607 - 64947 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.