Cluster: BrooksB_2017_SRR5405894_bin.8_CGC67
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate: host glycan/beta-glucan
- Genome ID: BrooksB_2017_SRR5405894_bin.8
- CGC Family ID: CGCFAM_00020
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BrooksB_2017_SRR5405894_bin.8_k119_6759 | BrooksB_2017_SRR5405894_bin.8_k119_6759_13 | 11270 | 12496 | - | 2.A.1.32.3 |
| TF | BrooksB_2017_SRR5405894_bin.8_k119_6759 | BrooksB_2017_SRR5405894_bin.8_k119_6759_14 | 12602 | 13129 | - | PadR |
| pfam | BrooksB_2017_SRR5405894_bin.8_k119_6759 | BrooksB_2017_SRR5405894_bin.8_k119_6759_15 | 13515 | 14366 | + | PRD | PRD | CAT_RBD |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_6759 | BrooksB_2017_SRR5405894_bin.8_k119_6759_16 | 14363 | 16222 | + | 4.A.1.2.11 |
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_6759 | BrooksB_2017_SRR5405894_bin.8_k119_6759_17 | 16235 | 17659 | + | GH1 |
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6759_13
Type: TC
Location: 11270 - 12496 (-)
Type: TC
Location: 11270 - 12496 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6759_14
Type: TF
Location: 12602 - 13129 (-)
Type: TF
Location: 12602 - 13129 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6759_15
Type: pfam
Location: 13515 - 14366 (+)
Type: pfam
Location: 13515 - 14366 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6759_16
Type: TC
Location: 14363 - 16222 (+)
Type: TC
Location: 14363 - 16222 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6759_17
Type: CAZyme
Location: 16235 - 17659 (+)
Type: CAZyme
Location: 16235 - 17659 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.