Cluster: BrooksB_2017_SRR5405894_bin.8_CGC66
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: BrooksB_2017_SRR5405894_bin.8
- CGC Family ID: CGCFAM_02352
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BrooksB_2017_SRR5405894_bin.8_k119_6759 | BrooksB_2017_SRR5405894_bin.8_k119_6759_1 | 631 | 1956 | + | 3.D.6.1.2 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_6759 | BrooksB_2017_SRR5405894_bin.8_k119_6759_2 | 1953 | 2894 | + | 3.D.6.1.2 |
| pfam | BrooksB_2017_SRR5405894_bin.8_k119_6759 | BrooksB_2017_SRR5405894_bin.8_k119_6759_3 | 2891 | 3454 | + | FMN_bind |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_6759 | BrooksB_2017_SRR5405894_bin.8_k119_6759_4 | 3467 | 4144 | + | 3.D.6.1.2 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_6759 | BrooksB_2017_SRR5405894_bin.8_k119_6759_5 | 4144 | 4734 | + | 3.D.6.1.2 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_6759 | BrooksB_2017_SRR5405894_bin.8_k119_6759_6 | 4747 | 5559 | + | 3.D.6.1.2 |
| pfam | BrooksB_2017_SRR5405894_bin.8_k119_6759 | BrooksB_2017_SRR5405894_bin.8_k119_6759_7 | 5629 | 6339 | + | Glucosamine_iso |
| pfam | BrooksB_2017_SRR5405894_bin.8_k119_6759 | BrooksB_2017_SRR5405894_bin.8_k119_6759_8 | 6393 | 7106 | - | Glucosamine_iso |
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_6759 | BrooksB_2017_SRR5405894_bin.8_k119_6759_9 | 7479 | 8924 | + | GH1 |
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6759_1
Type: TC
Location: 631 - 1956 (+)
Type: TC
Location: 631 - 1956 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6759_2
Type: TC
Location: 1953 - 2894 (+)
Type: TC
Location: 1953 - 2894 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6759_3
Type: pfam
Location: 2891 - 3454 (+)
Type: pfam
Location: 2891 - 3454 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6759_4
Type: TC
Location: 3467 - 4144 (+)
Type: TC
Location: 3467 - 4144 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6759_5
Type: TC
Location: 4144 - 4734 (+)
Type: TC
Location: 4144 - 4734 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6759_6
Type: TC
Location: 4747 - 5559 (+)
Type: TC
Location: 4747 - 5559 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6759_7
Type: pfam
Location: 5629 - 6339 (+)
Type: pfam
Location: 5629 - 6339 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6759_8
Type: pfam
Location: 6393 - 7106 (-)
Type: pfam
Location: 6393 - 7106 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6759_9
Type: CAZyme
Location: 7479 - 8924 (+)
Type: CAZyme
Location: 7479 - 8924 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.