Cluster: BrooksB_2017_SRR5405894_bin.8_CGC64
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: BrooksB_2017_SRR5405894_bin.8
- CGC Family ID: CGCFAM_00191
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BrooksB_2017_SRR5405894_bin.8_k119_6349 | BrooksB_2017_SRR5405894_bin.8_k119_6349_61 | 66880 | 67314 | + | 4.A.6.1.15 |
| pfam | BrooksB_2017_SRR5405894_bin.8_k119_6349 | BrooksB_2017_SRR5405894_bin.8_k119_6349_62 | 67316 | 67591 | + | YajC |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_6349 | BrooksB_2017_SRR5405894_bin.8_k119_6349_63 | 67608 | 68093 | + | 4.A.6.1.4 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_6349 | BrooksB_2017_SRR5405894_bin.8_k119_6349_64 | 68114 | 68917 | + | 4.A.6.1.4 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_6349 | BrooksB_2017_SRR5405894_bin.8_k119_6349_65 | 68907 | 69950 | + | 4.A.6.1.4 |
| TF | BrooksB_2017_SRR5405894_bin.8_k119_6349 | BrooksB_2017_SRR5405894_bin.8_k119_6349_66 | 70101 | 70829 | + | GntR |
| STP | BrooksB_2017_SRR5405894_bin.8_k119_6349 | BrooksB_2017_SRR5405894_bin.8_k119_6349_67 | 70842 | 72014 | + | SIS | SIS |
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_6349 | BrooksB_2017_SRR5405894_bin.8_k119_6349_68 | 72022 | 73188 | + | CE9 |
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6349_61
Type: TC
Location: 66880 - 67314 (+)
Type: TC
Location: 66880 - 67314 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6349_62
Type: pfam
Location: 67316 - 67591 (+)
Type: pfam
Location: 67316 - 67591 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6349_63
Type: TC
Location: 67608 - 68093 (+)
Type: TC
Location: 67608 - 68093 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6349_64
Type: TC
Location: 68114 - 68917 (+)
Type: TC
Location: 68114 - 68917 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6349_65
Type: TC
Location: 68907 - 69950 (+)
Type: TC
Location: 68907 - 69950 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6349_66
Type: TF
Location: 70101 - 70829 (+)
Type: TF
Location: 70101 - 70829 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6349_67
Type: STP
Location: 70842 - 72014 (+)
Type: STP
Location: 70842 - 72014 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6349_68
Type: CAZyme
Location: 72022 - 73188 (+)
Type: CAZyme
Location: 72022 - 73188 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.