Cluster: BrooksB_2017_SRR5405894_bin.8_CGC63
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: BrooksB_2017_SRR5405894_bin.8
- CGC Family ID: CGCFAM_02704
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BrooksB_2017_SRR5405894_bin.8_k119_6349 | BrooksB_2017_SRR5405894_bin.8_k119_6349_2 | 1814 | 3292 | + | 2.A.1.3.33 |
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_6349 | BrooksB_2017_SRR5405894_bin.8_k119_6349_3 | 3315 | 4103 | + | CE1 |
| pfam | BrooksB_2017_SRR5405894_bin.8_k119_6349 | BrooksB_2017_SRR5405894_bin.8_k119_6349_4 | 4115 | 4678 | - | PCMT | Ubie_methyltran | rRNA_methylase | Methyltransf_25 | Methyltransf_31 |
| pfam | BrooksB_2017_SRR5405894_bin.8_k119_6349 | BrooksB_2017_SRR5405894_bin.8_k119_6349_5 | 4653 | 5633 | - | Radical_SAM | Radical_SAM_C |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_6349 | BrooksB_2017_SRR5405894_bin.8_k119_6349_6 | 5634 | 6290 | - | 9.B.105.2.1 |
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6349_2
Type: TC
Location: 1814 - 3292 (+)
Type: TC
Location: 1814 - 3292 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6349_3
Type: CAZyme
Location: 3315 - 4103 (+)
Type: CAZyme
Location: 3315 - 4103 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6349_4
Type: pfam
Location: 4115 - 4678 (-)
Type: pfam
Location: 4115 - 4678 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6349_5
Type: pfam
Location: 4653 - 5633 (-)
Type: pfam
Location: 4653 - 5633 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6349_6
Type: TC
Location: 5634 - 6290 (-)
Type: TC
Location: 5634 - 6290 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.