Cluster: BrooksB_2017_SRR5405894_bin.8_CGC61
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: BrooksB_2017_SRR5405894_bin.8
- CGC Family ID: CGCFAM_01740
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BrooksB_2017_SRR5405894_bin.8_k119_5580 | BrooksB_2017_SRR5405894_bin.8_k119_5580_158 | 170117 | 171691 | + | 2.A.49.5.5 |
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_5580 | BrooksB_2017_SRR5405894_bin.8_k119_5580_159 | 171858 | 173318 | - | GH13_5 |
| TF | BrooksB_2017_SRR5405894_bin.8_k119_5580 | BrooksB_2017_SRR5405894_bin.8_k119_5580_160 | 173478 | 174230 | + | HTH_DeoR |
| STP | BrooksB_2017_SRR5405894_bin.8_k119_5580 | BrooksB_2017_SRR5405894_bin.8_k119_5580_161 | 174227 | 175141 | + | PfkB |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_5580 | BrooksB_2017_SRR5405894_bin.8_k119_5580_162 | 175194 | 177107 | + | 4.A.2.1.20 |
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_5580_158
Type: TC
Location: 170117 - 171691 (+)
Type: TC
Location: 170117 - 171691 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_5580_159
Type: CAZyme
Location: 171858 - 173318 (-)
Type: CAZyme
Location: 171858 - 173318 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_5580_160
Type: TF
Location: 173478 - 174230 (+)
Type: TF
Location: 173478 - 174230 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_5580_161
Type: STP
Location: 174227 - 175141 (+)
Type: STP
Location: 174227 - 175141 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_5580_162
Type: TC
Location: 175194 - 177107 (+)
Type: TC
Location: 175194 - 177107 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.