Cluster: BrooksB_2017_SRR5405894_bin.8_CGC60
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: BrooksB_2017_SRR5405894_bin.8
- CGC Family ID: CGCFAM_07869
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BrooksB_2017_SRR5405894_bin.8_k119_5580 | BrooksB_2017_SRR5405894_bin.8_k119_5580_121 | 127858 | 128967 | - | 3.D.2.1.1 |
| TF | BrooksB_2017_SRR5405894_bin.8_k119_5580 | BrooksB_2017_SRR5405894_bin.8_k119_5580_122 | 129305 | 129742 | - | FUR |
| STP | BrooksB_2017_SRR5405894_bin.8_k119_5580 | BrooksB_2017_SRR5405894_bin.8_k119_5580_123 | 129845 | 130765 | - | PALP |
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_5580 | BrooksB_2017_SRR5405894_bin.8_k119_5580_124 | 131104 | 131973 | - | GH73 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_5580 | BrooksB_2017_SRR5405894_bin.8_k119_5580_125 | 132254 | 134857 | - | 3.A.9.1.2 |
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_5580_121
Type: TC
Location: 127858 - 128967 (-)
Type: TC
Location: 127858 - 128967 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_5580_122
Type: TF
Location: 129305 - 129742 (-)
Type: TF
Location: 129305 - 129742 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_5580_123
Type: STP
Location: 129845 - 130765 (-)
Type: STP
Location: 129845 - 130765 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_5580_124
Type: CAZyme
Location: 131104 - 131973 (-)
Type: CAZyme
Location: 131104 - 131973 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_5580_125
Type: TC
Location: 132254 - 134857 (-)
Type: TC
Location: 132254 - 134857 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.