Cluster: BrooksB_2017_SRR5405894_bin.8_CGC58
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate: host glycan/beta-glucan
- Genome ID: BrooksB_2017_SRR5405894_bin.8
- CGC Family ID: CGCFAM_00020
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BrooksB_2017_SRR5405894_bin.8_k119_5235 | BrooksB_2017_SRR5405894_bin.8_k119_5235_32 | 29021 | 29653 | - | 2.A.115.2.3 |
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_5235 | BrooksB_2017_SRR5405894_bin.8_k119_5235_33 | 29691 | 31154 | - | GH1 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_5235 | BrooksB_2017_SRR5405894_bin.8_k119_5235_34 | 31170 | 32756 | - | 4.A.1.2.6 |
| pfam | BrooksB_2017_SRR5405894_bin.8_k119_5235 | BrooksB_2017_SRR5405894_bin.8_k119_5235_35 | 32888 | 33718 | - | PRD | PRD | CAT_RBD |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_5235 | BrooksB_2017_SRR5405894_bin.8_k119_5235_36 | 33791 | 34273 | - | 4.A.1.1.2 |
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_5235_32
Type: TC
Location: 29021 - 29653 (-)
Type: TC
Location: 29021 - 29653 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_5235_33
Type: CAZyme
Location: 29691 - 31154 (-)
Type: CAZyme
Location: 29691 - 31154 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_5235_34
Type: TC
Location: 31170 - 32756 (-)
Type: TC
Location: 31170 - 32756 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_5235_35
Type: pfam
Location: 32888 - 33718 (-)
Type: pfam
Location: 32888 - 33718 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_5235_36
Type: TC
Location: 33791 - 34273 (-)
Type: TC
Location: 33791 - 34273 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.