Cluster: BrooksB_2017_SRR5405894_bin.8_CGC57
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: BrooksB_2017_SRR5405894_bin.8
- CGC Family ID: CGCFAM_00027
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_5235 | BrooksB_2017_SRR5405894_bin.8_k119_5235_11 | 7266 | 8321 | - | CE1 |
| TF | BrooksB_2017_SRR5405894_bin.8_k119_5235 | BrooksB_2017_SRR5405894_bin.8_k119_5235_12 | 8610 | 9482 | + | HTH_6 |
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_5235 | BrooksB_2017_SRR5405894_bin.8_k119_5235_13 | 9511 | 10458 | + | GH179 |
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_5235 | BrooksB_2017_SRR5405894_bin.8_k119_5235_14 | 10565 | 12016 | - | GH1 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_5235 | BrooksB_2017_SRR5405894_bin.8_k119_5235_15 | 12036 | 13883 | - | 4.A.1.2.11 |
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_5235_11
Type: CAZyme
Location: 7266 - 8321 (-)
Type: CAZyme
Location: 7266 - 8321 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_5235_12
Type: TF
Location: 8610 - 9482 (+)
Type: TF
Location: 8610 - 9482 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_5235_13
Type: CAZyme
Location: 9511 - 10458 (+)
Type: CAZyme
Location: 9511 - 10458 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_5235_14
Type: CAZyme
Location: 10565 - 12016 (-)
Type: CAZyme
Location: 10565 - 12016 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_5235_15
Type: TC
Location: 12036 - 13883 (-)
Type: TC
Location: 12036 - 13883 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.