Cluster: BrooksB_2017_SRR5405894_bin.8_CGC55
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: BrooksB_2017_SRR5405894_bin.8
- CGC Family ID: CGCFAM_07868
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BrooksB_2017_SRR5405894_bin.8_k119_4906 | BrooksB_2017_SRR5405894_bin.8_k119_4906_30 | 33941 | 35860 | - | 2.A.67.4.2 |
| peptidase | BrooksB_2017_SRR5405894_bin.8_k119_4906 | BrooksB_2017_SRR5405894_bin.8_k119_4906_31 | 35946 | 37364 | - | M20.UPA |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_4906 | BrooksB_2017_SRR5405894_bin.8_k119_4906_32 | 37994 | 40609 | - | 8.A.7.1.5 |
| pfam | BrooksB_2017_SRR5405894_bin.8_k119_4906 | BrooksB_2017_SRR5405894_bin.8_k119_4906_33 | 40758 | 41129 | - | DUF1304 |
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_4906 | BrooksB_2017_SRR5405894_bin.8_k119_4906_34 | 41205 | 42953 | - | CBM34 | GH13_20 |
| NULL(UNKNOWN) | BrooksB_2017_SRR5405894_bin.8_k119_4906 | BrooksB_2017_SRR5405894_bin.8_k119_4906_35 | 43315 | 43443 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_4906 | BrooksB_2017_SRR5405894_bin.8_k119_4906_36 | 43517 | 45010 | + | 3.A.1.121.3 |
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_4906_30
Type: TC
Location: 33941 - 35860 (-)
Type: TC
Location: 33941 - 35860 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_4906_31
Type: peptidase
Location: 35946 - 37364 (-)
Type: peptidase
Location: 35946 - 37364 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_4906_32
Type: TC
Location: 37994 - 40609 (-)
Type: TC
Location: 37994 - 40609 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_4906_33
Type: pfam
Location: 40758 - 41129 (-)
Type: pfam
Location: 40758 - 41129 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_4906_34
Type: CAZyme
Location: 41205 - 42953 (-)
Type: CAZyme
Location: 41205 - 42953 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_4906_35
Type:
Location: 43315 - 43443 (-)
Type:
Location: 43315 - 43443 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_4906_36
Type: TC
Location: 43517 - 45010 (+)
Type: TC
Location: 43517 - 45010 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.