Cluster: BrooksB_2017_SRR5405894_bin.8_CGC54
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: BrooksB_2017_SRR5405894_bin.8
- CGC Family ID: CGCFAM_02532
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_4906 | BrooksB_2017_SRR5405894_bin.8_k119_4906_2 | 1547 | 4120 | + | GT51 |
| NULL(UNKNOWN) | BrooksB_2017_SRR5405894_bin.8_k119_4906 | BrooksB_2017_SRR5405894_bin.8_k119_4906_3 | 4191 | 4640 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_4906 | BrooksB_2017_SRR5405894_bin.8_k119_4906_4 | 4705 | 6093 | - | GH1 |
| TF | BrooksB_2017_SRR5405894_bin.8_k119_4906 | BrooksB_2017_SRR5405894_bin.8_k119_4906_5 | 6227 | 7195 | - | LacI |
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_4906 | BrooksB_2017_SRR5405894_bin.8_k119_4906_6 | 7255 | 9552 | - | GH3 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_4906 | BrooksB_2017_SRR5405894_bin.8_k119_4906_7 | 9545 | 10879 | - | 4.A.3.2.9 |
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_4906_2
Type: CAZyme
Location: 1547 - 4120 (+)
Type: CAZyme
Location: 1547 - 4120 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_4906_3
Type:
Location: 4191 - 4640 (+)
Type:
Location: 4191 - 4640 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_4906_4
Type: CAZyme
Location: 4705 - 6093 (-)
Type: CAZyme
Location: 4705 - 6093 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_4906_5
Type: TF
Location: 6227 - 7195 (-)
Type: TF
Location: 6227 - 7195 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_4906_6
Type: CAZyme
Location: 7255 - 9552 (-)
Type: CAZyme
Location: 7255 - 9552 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_4906_7
Type: TC
Location: 9545 - 10879 (-)
Type: TC
Location: 9545 - 10879 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.