Cluster: BrooksB_2017_SRR5405894_bin.8_CGC53
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate: beta-glucan
- Genome ID: BrooksB_2017_SRR5405894_bin.8
- CGC Family ID: CGCFAM_00176
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BrooksB_2017_SRR5405894_bin.8_k119_4292 | BrooksB_2017_SRR5405894_bin.8_k119_4292_58 | 53808 | 55085 | + | 2.A.1.11.1 |
| TF | BrooksB_2017_SRR5405894_bin.8_k119_4292 | BrooksB_2017_SRR5405894_bin.8_k119_4292_59 | 55270 | 55704 | + | MarR |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_4292 | BrooksB_2017_SRR5405894_bin.8_k119_4292_60 | 55708 | 57087 | + | 2.A.66.1.32 |
| TF | BrooksB_2017_SRR5405894_bin.8_k119_4292 | BrooksB_2017_SRR5405894_bin.8_k119_4292_61 | 57139 | 59061 | - | HTH_11 | Mga |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_4292 | BrooksB_2017_SRR5405894_bin.8_k119_4292_62 | 59238 | 59555 | + | 4.A.3.2.3 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_4292 | BrooksB_2017_SRR5405894_bin.8_k119_4292_63 | 59634 | 60902 | + | 4.A.3.2.6 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_4292 | BrooksB_2017_SRR5405894_bin.8_k119_4292_64 | 60903 | 61265 | + | 4.A.3.2.2 |
| pfam | BrooksB_2017_SRR5405894_bin.8_k119_4292 | BrooksB_2017_SRR5405894_bin.8_k119_4292_65 | 61277 | 62059 | + | His_Phos_1 | His_Phos_1 |
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_4292 | BrooksB_2017_SRR5405894_bin.8_k119_4292_66 | 62133 | 63563 | + | GH1 |
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_4292_58
Type: TC
Location: 53808 - 55085 (+)
Type: TC
Location: 53808 - 55085 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_4292_59
Type: TF
Location: 55270 - 55704 (+)
Type: TF
Location: 55270 - 55704 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_4292_60
Type: TC
Location: 55708 - 57087 (+)
Type: TC
Location: 55708 - 57087 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_4292_61
Type: TF
Location: 57139 - 59061 (-)
Type: TF
Location: 57139 - 59061 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_4292_62
Type: TC
Location: 59238 - 59555 (+)
Type: TC
Location: 59238 - 59555 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_4292_63
Type: TC
Location: 59634 - 60902 (+)
Type: TC
Location: 59634 - 60902 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_4292_64
Type: TC
Location: 60903 - 61265 (+)
Type: TC
Location: 60903 - 61265 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_4292_65
Type: pfam
Location: 61277 - 62059 (+)
Type: pfam
Location: 61277 - 62059 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_4292_66
Type: CAZyme
Location: 62133 - 63563 (+)
Type: CAZyme
Location: 62133 - 63563 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.