Cluster: BrooksB_2017_SRR5405894_bin.8_CGC52
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: BrooksB_2017_SRR5405894_bin.8
- CGC Family ID: CGCFAM_03022
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BrooksB_2017_SRR5405894_bin.8_k119_4131 | BrooksB_2017_SRR5405894_bin.8_k119_4131_76 | 93115 | 93414 | + | 2.A.53.3.4 |
| pfam | BrooksB_2017_SRR5405894_bin.8_k119_4131 | BrooksB_2017_SRR5405894_bin.8_k119_4131_77 | 93605 | 94282 | + | DeoC |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_4131 | BrooksB_2017_SRR5405894_bin.8_k119_4131_78 | 94287 | 94733 | + | 4.A.2.1.14 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_4131 | BrooksB_2017_SRR5405894_bin.8_k119_4131_79 | 94749 | 96125 | + | 4.A.2.1.1 |
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_4131 | BrooksB_2017_SRR5405894_bin.8_k119_4131_80 | 96134 | 97156 | + | GH177 |
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_4131_76
Type: TC
Location: 93115 - 93414 (+)
Type: TC
Location: 93115 - 93414 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_4131_77
Type: pfam
Location: 93605 - 94282 (+)
Type: pfam
Location: 93605 - 94282 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_4131_78
Type: TC
Location: 94287 - 94733 (+)
Type: TC
Location: 94287 - 94733 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_4131_79
Type: TC
Location: 94749 - 96125 (+)
Type: TC
Location: 94749 - 96125 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_4131_80
Type: CAZyme
Location: 96134 - 97156 (+)
Type: CAZyme
Location: 96134 - 97156 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.