Cluster: BrooksB_2017_SRR5405894_bin.8_CGC50
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate: beta-glucan
- Genome ID: BrooksB_2017_SRR5405894_bin.8
- CGC Family ID: CGCFAM_00176
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BrooksB_2017_SRR5405894_bin.8_k119_4109 | BrooksB_2017_SRR5405894_bin.8_k119_4109_168 | 176402 | 177751 | + | 2.A.3.8.12 |
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_4109 | BrooksB_2017_SRR5405894_bin.8_k119_4109_169 | 177960 | 179393 | + | GH1 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_4109 | BrooksB_2017_SRR5405894_bin.8_k119_4109_170 | 179484 | 179798 | + | 4.A.3.2.6 |
| TF | BrooksB_2017_SRR5405894_bin.8_k119_4109 | BrooksB_2017_SRR5405894_bin.8_k119_4109_171 | 179814 | 181832 | + | HTH_11 | Mga |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_4109 | BrooksB_2017_SRR5405894_bin.8_k119_4109_172 | 181846 | 182160 | + | 4.A.3.2.2 |
| NULL(UNKNOWN) | BrooksB_2017_SRR5405894_bin.8_k119_4109 | BrooksB_2017_SRR5405894_bin.8_k119_4109_173 | 182199 | 182708 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_4109 | BrooksB_2017_SRR5405894_bin.8_k119_4109_174 | 182725 | 184101 | + | 4.A.3.2.3 |
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_4109_168
Type: TC
Location: 176402 - 177751 (+)
Type: TC
Location: 176402 - 177751 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_4109_169
Type: CAZyme
Location: 177960 - 179393 (+)
Type: CAZyme
Location: 177960 - 179393 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_4109_170
Type: TC
Location: 179484 - 179798 (+)
Type: TC
Location: 179484 - 179798 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_4109_171
Type: TF
Location: 179814 - 181832 (+)
Type: TF
Location: 179814 - 181832 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_4109_172
Type: TC
Location: 181846 - 182160 (+)
Type: TC
Location: 181846 - 182160 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_4109_173
Type:
Location: 182199 - 182708 (+)
Type:
Location: 182199 - 182708 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_4109_174
Type: TC
Location: 182725 - 184101 (+)
Type: TC
Location: 182725 - 184101 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.