Cluster: BrooksB_2017_SRR5405894_bin.8_CGC49
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate: alpha-glucan
- Genome ID: BrooksB_2017_SRR5405894_bin.8
- CGC Family ID: CGCFAM_00037
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_4109 | BrooksB_2017_SRR5405894_bin.8_k119_4109_147 | 148652 | 150274 | - | GH13_31 |
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_4109 | BrooksB_2017_SRR5405894_bin.8_k119_4109_148 | 150271 | 151902 | - | GH13_31 |
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_4109 | BrooksB_2017_SRR5405894_bin.8_k119_4109_149 | 151934 | 153700 | - | CBM34 | GH13_20 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_4109 | BrooksB_2017_SRR5405894_bin.8_k119_4109_150 | 153715 | 154818 | - | 3.A.1.1.28 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_4109 | BrooksB_2017_SRR5405894_bin.8_k119_4109_151 | 155148 | 156404 | + | 3.A.1.1.27 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_4109 | BrooksB_2017_SRR5405894_bin.8_k119_4109_152 | 156498 | 157859 | + | 3.A.1.1.27 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_4109 | BrooksB_2017_SRR5405894_bin.8_k119_4109_153 | 157859 | 158698 | + | 3.A.1.1.27 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_4109 | BrooksB_2017_SRR5405894_bin.8_k119_4109_154 | 158828 | 159733 | + | 1.A.35.3.4 |
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_4109_147
Type: CAZyme
Location: 148652 - 150274 (-)
Type: CAZyme
Location: 148652 - 150274 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_4109_148
Type: CAZyme
Location: 150271 - 151902 (-)
Type: CAZyme
Location: 150271 - 151902 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_4109_149
Type: CAZyme
Location: 151934 - 153700 (-)
Type: CAZyme
Location: 151934 - 153700 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_4109_150
Type: TC
Location: 153715 - 154818 (-)
Type: TC
Location: 153715 - 154818 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_4109_151
Type: TC
Location: 155148 - 156404 (+)
Type: TC
Location: 155148 - 156404 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_4109_152
Type: TC
Location: 156498 - 157859 (+)
Type: TC
Location: 156498 - 157859 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_4109_153
Type: TC
Location: 157859 - 158698 (+)
Type: TC
Location: 157859 - 158698 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_4109_154
Type: TC
Location: 158828 - 159733 (+)
Type: TC
Location: 158828 - 159733 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.