Cluster: BrooksB_2017_SRR5405894_bin.8_CGC48
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: BrooksB_2017_SRR5405894_bin.8
- CGC Family ID: CGCFAM_00958
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BrooksB_2017_SRR5405894_bin.8_k119_4109 | BrooksB_2017_SRR5405894_bin.8_k119_4109_120 | 118809 | 120119 | + | 4.A.3.2.9 |
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_4109 | BrooksB_2017_SRR5405894_bin.8_k119_4109_121 | 120136 | 121554 | + | GH1 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_4109 | BrooksB_2017_SRR5405894_bin.8_k119_4109_122 | 121607 | 122269 | - | 3.A.1.12.4 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_4109 | BrooksB_2017_SRR5405894_bin.8_k119_4109_123 | 122275 | 123192 | - | 3.A.1.12.4 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_4109 | BrooksB_2017_SRR5405894_bin.8_k119_4109_124 | 123196 | 123831 | - | 3.A.1.12.4 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_4109 | BrooksB_2017_SRR5405894_bin.8_k119_4109_125 | 123834 | 125006 | - | 3.A.1.12.4 |
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_4109_120
Type: TC
Location: 118809 - 120119 (+)
Type: TC
Location: 118809 - 120119 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_4109_121
Type: CAZyme
Location: 120136 - 121554 (+)
Type: CAZyme
Location: 120136 - 121554 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_4109_122
Type: TC
Location: 121607 - 122269 (-)
Type: TC
Location: 121607 - 122269 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_4109_123
Type: TC
Location: 122275 - 123192 (-)
Type: TC
Location: 122275 - 123192 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_4109_124
Type: TC
Location: 123196 - 123831 (-)
Type: TC
Location: 123196 - 123831 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_4109_125
Type: TC
Location: 123834 - 125006 (-)
Type: TC
Location: 123834 - 125006 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.