Cluster: BrooksB_2017_SRR5405894_bin.8_CGC47
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: BrooksB_2017_SRR5405894_bin.8
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BrooksB_2017_SRR5405894_bin.8_k119_3854 | BrooksB_2017_SRR5405894_bin.8_k119_3854_142 | 148798 | 150204 | - | 4.A.2.1.4 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_3854 | BrooksB_2017_SRR5405894_bin.8_k119_3854_143 | 150371 | 150811 | - | 4.A.2.1.8 |
| pfam | BrooksB_2017_SRR5405894_bin.8_k119_3854 | BrooksB_2017_SRR5405894_bin.8_k119_3854_144 | 151073 | 151633 | - | ICMT | PEMT | DUF1295 |
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_3854 | BrooksB_2017_SRR5405894_bin.8_k119_3854_145 | 151841 | 154906 | - | GH2 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_3854 | BrooksB_2017_SRR5405894_bin.8_k119_3854_146 | 154903 | 156399 | - | 2.A.3.7.4 |
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_3854_142
Type: TC
Location: 148798 - 150204 (-)
Type: TC
Location: 148798 - 150204 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_3854_143
Type: TC
Location: 150371 - 150811 (-)
Type: TC
Location: 150371 - 150811 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_3854_144
Type: pfam
Location: 151073 - 151633 (-)
Type: pfam
Location: 151073 - 151633 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_3854_145
Type: CAZyme
Location: 151841 - 154906 (-)
Type: CAZyme
Location: 151841 - 154906 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_3854_146
Type: TC
Location: 154903 - 156399 (-)
Type: TC
Location: 154903 - 156399 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.