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Cluster: BrooksB_2017_SRR5405894_bin.8_CGC44

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme BrooksB_2017_SRR5405894_bin.8_k119_3854 BrooksB_2017_SRR5405894_bin.8_k119_3854_31 35157 36089 - GH36
CAZyme BrooksB_2017_SRR5405894_bin.8_k119_3854 BrooksB_2017_SRR5405894_bin.8_k119_3854_32 36378 37235 - GH36
TC BrooksB_2017_SRR5405894_bin.8_k119_3854 BrooksB_2017_SRR5405894_bin.8_k119_3854_33 37340 38164 - 4.A.6.1.16
pfam BrooksB_2017_SRR5405894_bin.8_k119_3854 BrooksB_2017_SRR5405894_bin.8_k119_3854_34 38164 38985 - EII-Sor
TC BrooksB_2017_SRR5405894_bin.8_k119_3854 BrooksB_2017_SRR5405894_bin.8_k119_3854_35 39001 39471 - 4.A.6.1.8
pfam BrooksB_2017_SRR5405894_bin.8_k119_3854 BrooksB_2017_SRR5405894_bin.8_k119_3854_36 39483 39905 - EIIA-man
CAZyme BrooksB_2017_SRR5405894_bin.8_k119_3854 BrooksB_2017_SRR5405894_bin.8_k119_3854_37 39931 41157 - GH28
TF BrooksB_2017_SRR5405894_bin.8_k119_3854 BrooksB_2017_SRR5405894_bin.8_k119_3854_38 41348 42331 + HTH_AraC | HTH_AraC
CAZyme BrooksB_2017_SRR5405894_bin.8_k119_3854 BrooksB_2017_SRR5405894_bin.8_k119_3854_39 42375 44591 - GH146
TC BrooksB_2017_SRR5405894_bin.8_k119_3854 BrooksB_2017_SRR5405894_bin.8_k119_3854_40 44592 45857 - 2.A.23.1.2
TF BrooksB_2017_SRR5405894_bin.8_k119_3854 BrooksB_2017_SRR5405894_bin.8_k119_3854_41 46072 46983 + HTH_AraC
TC BrooksB_2017_SRR5405894_bin.8_k119_3854 BrooksB_2017_SRR5405894_bin.8_k119_3854_42 47075 47395 - 4.A.3.2.6
TC BrooksB_2017_SRR5405894_bin.8_k119_3854 BrooksB_2017_SRR5405894_bin.8_k119_3854_43 47409 48614 - 3.A.1.2.5
TC BrooksB_2017_SRR5405894_bin.8_k119_3854 BrooksB_2017_SRR5405894_bin.8_k119_3854_44 48614 50146 - 3.A.1.2.22
TC BrooksB_2017_SRR5405894_bin.8_k119_3854 BrooksB_2017_SRR5405894_bin.8_k119_3854_45 50212 51300 - 3.A.1.2.5
TC BrooksB_2017_SRR5405894_bin.8_k119_3854 BrooksB_2017_SRR5405894_bin.8_k119_3854_46 51525 52490 + 3.A.1.2.14
TC BrooksB_2017_SRR5405894_bin.8_k119_3854 BrooksB_2017_SRR5405894_bin.8_k119_3854_47 52501 53946 + 9.B.33.1.1
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_3854_31
Type: CAZyme
Location: 35157 - 36089 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_3854_32
Type: CAZyme
Location: 36378 - 37235 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_3854_33
Type: TC
Location: 37340 - 38164 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_3854_34
Type: pfam
Location: 38164 - 38985 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_3854_35
Type: TC
Location: 39001 - 39471 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_3854_36
Type: pfam
Location: 39483 - 39905 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_3854_37
Type: CAZyme
Location: 39931 - 41157 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_3854_38
Type: TF
Location: 41348 - 42331 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_3854_39
Type: CAZyme
Location: 42375 - 44591 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_3854_40
Type: TC
Location: 44592 - 45857 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_3854_41
Type: TF
Location: 46072 - 46983 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_3854_42
Type: TC
Location: 47075 - 47395 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_3854_43
Type: TC
Location: 47409 - 48614 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_3854_44
Type: TC
Location: 48614 - 50146 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_3854_45
Type: TC
Location: 50212 - 51300 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_3854_46
Type: TC
Location: 51525 - 52490 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_3854_47
Type: TC
Location: 52501 - 53946 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
Lactobacillales
→
Family
Enterococcaceae
→
Genus
Enterococcus_A
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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