Cluster: BrooksB_2017_SRR5405894_bin.8_CGC42
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: BrooksB_2017_SRR5405894_bin.8
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_3736 | BrooksB_2017_SRR5405894_bin.8_k119_3736_77 | 74918 | 76030 | + | GH179 |
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_3736 | BrooksB_2017_SRR5405894_bin.8_k119_3736_78 | 76090 | 77184 | + | GH179 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_3736 | BrooksB_2017_SRR5405894_bin.8_k119_3736_79 | 77203 | 78558 | + | 2.A.1.15.5 |
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_3736 | BrooksB_2017_SRR5405894_bin.8_k119_3736_80 | 78684 | 81128 | + | GH39 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_3736 | BrooksB_2017_SRR5405894_bin.8_k119_3736_81 | 81380 | 83242 | + | 4.A.1.2.3 |
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_3736_77
Type: CAZyme
Location: 74918 - 76030 (+)
Type: CAZyme
Location: 74918 - 76030 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_3736_78
Type: CAZyme
Location: 76090 - 77184 (+)
Type: CAZyme
Location: 76090 - 77184 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_3736_79
Type: TC
Location: 77203 - 78558 (+)
Type: TC
Location: 77203 - 78558 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_3736_80
Type: CAZyme
Location: 78684 - 81128 (+)
Type: CAZyme
Location: 78684 - 81128 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_3736_81
Type: TC
Location: 81380 - 83242 (+)
Type: TC
Location: 81380 - 83242 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.