Cluster: BrooksB_2017_SRR5405894_bin.8_CGC40
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: BrooksB_2017_SRR5405894_bin.8
- CGC Family ID: CGCFAM_00131
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BrooksB_2017_SRR5405894_bin.8_k119_3736 | BrooksB_2017_SRR5405894_bin.8_k119_3736_15 | 16473 | 18062 | + | 4.A.1.1.8 |
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_3736 | BrooksB_2017_SRR5405894_bin.8_k119_3736_16 | 18087 | 19418 | + | GH4 |
| TF | BrooksB_2017_SRR5405894_bin.8_k119_3736 | BrooksB_2017_SRR5405894_bin.8_k119_3736_17 | 19483 | 20262 | + | HTH_6 |
| NULL(UNKNOWN) | BrooksB_2017_SRR5405894_bin.8_k119_3736 | BrooksB_2017_SRR5405894_bin.8_k119_3736_18 | 20293 | 20745 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_3736 | BrooksB_2017_SRR5405894_bin.8_k119_3736_19 | 20748 | 21206 | + | 4.A.1.1.11 |
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_3736_15
Type: TC
Location: 16473 - 18062 (+)
Type: TC
Location: 16473 - 18062 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_3736_16
Type: CAZyme
Location: 18087 - 19418 (+)
Type: CAZyme
Location: 18087 - 19418 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_3736_17
Type: TF
Location: 19483 - 20262 (+)
Type: TF
Location: 19483 - 20262 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_3736_18
Type:
Location: 20293 - 20745 (+)
Type:
Location: 20293 - 20745 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_3736_19
Type: TC
Location: 20748 - 21206 (+)
Type: TC
Location: 20748 - 21206 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.