Cluster: BrooksB_2017_SRR5405894_bin.8_CGC4
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: BrooksB_2017_SRR5405894_bin.8
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BrooksB_2017_SRR5405894_bin.8_k119_695 | BrooksB_2017_SRR5405894_bin.8_k119_695_142 | 142622 | 143311 | + | 1.C.82.1.1 |
| pfam | BrooksB_2017_SRR5405894_bin.8_k119_695 | BrooksB_2017_SRR5405894_bin.8_k119_695_143 | 143535 | 144035 | + | Ribosomal_L10 |
| pfam | BrooksB_2017_SRR5405894_bin.8_k119_695 | BrooksB_2017_SRR5405894_bin.8_k119_695_144 | 144090 | 144458 | + | Ribosomal_L12 | Ribosomal_L12_N |
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_695 | BrooksB_2017_SRR5405894_bin.8_k119_695_145 | 144858 | 145436 | + | AA10 |
| NULL(UNKNOWN) | BrooksB_2017_SRR5405894_bin.8_k119_695 | BrooksB_2017_SRR5405894_bin.8_k119_695_146 | 145644 | 146291 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | BrooksB_2017_SRR5405894_bin.8_k119_695 | BrooksB_2017_SRR5405894_bin.8_k119_695_147 | 146484 | 146885 | + | OsmC |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_695 | BrooksB_2017_SRR5405894_bin.8_k119_695_148 | 147096 | 147755 | + | 1.A.8.13.3 |
| NULL(UNKNOWN) | BrooksB_2017_SRR5405894_bin.8_k119_695 | BrooksB_2017_SRR5405894_bin.8_k119_695_149 | 147814 | 148248 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_695 | BrooksB_2017_SRR5405894_bin.8_k119_695_150 | 148482 | 149816 | - | 2.A.3.1.22 |
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_695_142
Type: TC
Location: 142622 - 143311 (+)
Type: TC
Location: 142622 - 143311 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_695_143
Type: pfam
Location: 143535 - 144035 (+)
Type: pfam
Location: 143535 - 144035 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_695_144
Type: pfam
Location: 144090 - 144458 (+)
Type: pfam
Location: 144090 - 144458 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_695_145
Type: CAZyme
Location: 144858 - 145436 (+)
Type: CAZyme
Location: 144858 - 145436 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_695_146
Type:
Location: 145644 - 146291 (-)
Type:
Location: 145644 - 146291 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_695_147
Type: pfam
Location: 146484 - 146885 (+)
Type: pfam
Location: 146484 - 146885 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_695_148
Type: TC
Location: 147096 - 147755 (+)
Type: TC
Location: 147096 - 147755 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_695_149
Type:
Location: 147814 - 148248 (-)
Type:
Location: 147814 - 148248 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_695_150
Type: TC
Location: 148482 - 149816 (-)
Type: TC
Location: 148482 - 149816 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.