Cluster: BrooksB_2017_SRR5405894_bin.8_CGC37
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: BrooksB_2017_SRR5405894_bin.8
- CGC Family ID: CGCFAM_00264
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_3332 | BrooksB_2017_SRR5405894_bin.8_k119_3332_25 | 22567 | 24009 | - | GH1 |
| pfam | BrooksB_2017_SRR5405894_bin.8_k119_3332 | BrooksB_2017_SRR5405894_bin.8_k119_3332_26 | 24051 | 24392 | - | PTS_IIA |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_3332 | BrooksB_2017_SRR5405894_bin.8_k119_3332_27 | 24432 | 25703 | - | 4.A.3.1.3 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_3332 | BrooksB_2017_SRR5405894_bin.8_k119_3332_28 | 25707 | 25964 | - | 4.A.3.2.3 |
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_3332_25
Type: CAZyme
Location: 22567 - 24009 (-)
Type: CAZyme
Location: 22567 - 24009 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_3332_26
Type: pfam
Location: 24051 - 24392 (-)
Type: pfam
Location: 24051 - 24392 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_3332_27
Type: TC
Location: 24432 - 25703 (-)
Type: TC
Location: 24432 - 25703 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_3332_28
Type: TC
Location: 25707 - 25964 (-)
Type: TC
Location: 25707 - 25964 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.