Cluster: BrooksB_2017_SRR5405894_bin.8_CGC30
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 2
- Substrate:
- Genome ID: BrooksB_2017_SRR5405894_bin.8
- CGC Family ID: CGCFAM_01739
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_2674 | BrooksB_2017_SRR5405894_bin.8_k119_2674_79 | 79637 | 80569 | - | GT2 |
| pfam | BrooksB_2017_SRR5405894_bin.8_k119_2674 | BrooksB_2017_SRR5405894_bin.8_k119_2674_80 | 80585 | 82417 | - | DUF6056 |
| NULL(UNKNOWN) | BrooksB_2017_SRR5405894_bin.8_k119_2674 | BrooksB_2017_SRR5405894_bin.8_k119_2674_81 | 82456 | 82755 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_2674 | BrooksB_2017_SRR5405894_bin.8_k119_2674_82 | 82768 | 83433 | - | 2.A.38.4.4 |
| TF | BrooksB_2017_SRR5405894_bin.8_k119_2674 | BrooksB_2017_SRR5405894_bin.8_k119_2674_83 | 83520 | 84152 | - | GerE |
| STP | BrooksB_2017_SRR5405894_bin.8_k119_2674 | BrooksB_2017_SRR5405894_bin.8_k119_2674_84 | 84301 | 85401 | - | HATPase_c |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_2674 | BrooksB_2017_SRR5405894_bin.8_k119_2674_85 | 85398 | 86120 | - | 9.B.116.1.1 |
| pfam | BrooksB_2017_SRR5405894_bin.8_k119_2674 | BrooksB_2017_SRR5405894_bin.8_k119_2674_86 | 86256 | 86735 | - | GreA_GreB | GreA_GreB_N |
| pfam | BrooksB_2017_SRR5405894_bin.8_k119_2674 | BrooksB_2017_SRR5405894_bin.8_k119_2674_87 | 86831 | 88561 | - | YceG |
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_2674 | BrooksB_2017_SRR5405894_bin.8_k119_2674_88 | 88636 | 89604 | - | GT2 |
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_2674_79
Type: CAZyme
Location: 79637 - 80569 (-)
Type: CAZyme
Location: 79637 - 80569 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_2674_80
Type: pfam
Location: 80585 - 82417 (-)
Type: pfam
Location: 80585 - 82417 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_2674_81
Type:
Location: 82456 - 82755 (-)
Type:
Location: 82456 - 82755 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_2674_82
Type: TC
Location: 82768 - 83433 (-)
Type: TC
Location: 82768 - 83433 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_2674_83
Type: TF
Location: 83520 - 84152 (-)
Type: TF
Location: 83520 - 84152 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_2674_84
Type: STP
Location: 84301 - 85401 (-)
Type: STP
Location: 84301 - 85401 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_2674_85
Type: TC
Location: 85398 - 86120 (-)
Type: TC
Location: 85398 - 86120 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_2674_86
Type: pfam
Location: 86256 - 86735 (-)
Type: pfam
Location: 86256 - 86735 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_2674_87
Type: pfam
Location: 86831 - 88561 (-)
Type: pfam
Location: 86831 - 88561 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_2674_88
Type: CAZyme
Location: 88636 - 89604 (-)
Type: CAZyme
Location: 88636 - 89604 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.