Cluster: BrooksB_2017_SRR5405894_bin.8_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: BrooksB_2017_SRR5405894_bin.8
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BrooksB_2017_SRR5405894_bin.8_k119_695 | BrooksB_2017_SRR5405894_bin.8_k119_695_118 | 121210 | 122580 | + | 1.A.26.1.3 |
| STP | BrooksB_2017_SRR5405894_bin.8_k119_695 | BrooksB_2017_SRR5405894_bin.8_k119_695_119 | 122626 | 123066 | + | NUDIX |
| TF | BrooksB_2017_SRR5405894_bin.8_k119_695 | BrooksB_2017_SRR5405894_bin.8_k119_695_120 | 123087 | 123887 | - | HTH_6 |
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_695 | BrooksB_2017_SRR5405894_bin.8_k119_695_121 | 124056 | 125504 | + | GH1 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_695 | BrooksB_2017_SRR5405894_bin.8_k119_695_122 | 125618 | 126253 | - | 9.B.158.1.3 |
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_695_118
Type: TC
Location: 121210 - 122580 (+)
Type: TC
Location: 121210 - 122580 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_695_119
Type: STP
Location: 122626 - 123066 (+)
Type: STP
Location: 122626 - 123066 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_695_120
Type: TF
Location: 123087 - 123887 (-)
Type: TF
Location: 123087 - 123887 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_695_121
Type: CAZyme
Location: 124056 - 125504 (+)
Type: CAZyme
Location: 124056 - 125504 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_695_122
Type: TC
Location: 125618 - 126253 (-)
Type: TC
Location: 125618 - 126253 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.